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BaseInfo

ncRNA ID novel_zma_miR3278
Species Zea mays
Class miRNA
Genome position Chr6:130616529-130616583 [+]
Reference genome RefGen_v4
Source SRR2089715
Length 24
Mature sequence(if miRNA) 1 - CGAUGGGUAAACGGGGAUGGGGAC - 24
Stem-loop(if miRNA) --  A    UA              CGG
  CG UGGG  AACGGGGAUGGGGA   G
  || ||||  ||||||||||||||   G
  GC ACCC  UUGCCCCUACCCCU   A
GG  -    -C              UAA
Stem-loop sequence CGAUGGGUAAACGGGGAUGGGGACGGGGAAAUUCCCCAUCCCCGUUCCCCACGGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020542351.1
ncRNA:24   CAGGGGUAGGGGCAAAUGGGUAGC   1
  *|||||||||||||||||||=|||
targets:311   AUCCCCAUCCCCGUUUACCCGUCG   334

1.5 PREDICTED: Zea mays uncharacterized LOC103634680 (LOC103634680), transcript variant X5, mRNA NA coding protein psRNATarget