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BaseInfo

ncRNA ID	novel_zma_miR3273
Species	Zea mays
Class	miRNA
Genome position	Chr5:88205573-88205644 [+]
Reference genome	RefGen_v4
Source	SRR2089715
Length	24
Mature sequence(if miRNA)	1 - UCUGUCGUGCUUAUGGAAAGGGAG - 24
Stem-loop(if miRNA)	UCUG    G  - A GGAAAGGGAGACGAGUCAUCUA     UCGU CU U U                      C     |||| || | |     GGUA GG C A                      A -GAA    -  G - GUCGUCAUCUCUACGUUAUUUG
Stem-loop sequence	UCUGUCGUGCUUAUGGAAAGGGAGACGAGUCAUCUACAGUUUAUUGCAUCUCUACUGCUGACGGGAUGGAAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU952095.1	ncRNA:24   GAGGGAAAGGUAUUCGUGCUGUCU   1   |||||||*|||||||||||||||* targets:1601   CUCCCUUCCCAUAAGCACGACAGU   1624 Target Full Sequence	2.0	Zea mays clone 1164250 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU950655.1	ncRNA:24   GAGGGAAAGGUAUUCGUGCUGUCU   1   |||||||*|||*|||||||||||| targets:388   CUCCCUUCCCAGAAGCACGACAGA   411 Target Full Sequence	2.5	Zea mays clone 506469 mRNA sequence	NA	coding protein	psRNATarget
XM_020539364.1	ncRNA:24   GAGGGAAAGGUAUUCGUGCUGUCU   1   |||||||*|||*|||||||||||| targets:382   CUCCCUUCCCAGAAGCACGACAGA   405 Target Full Sequence	2.5	PREDICTED: Zea mays RNA-directed DNA polymerase (reverse transcriptase) (LOC103629684), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020539363.1	ncRNA:24   GAGGGAAAGGUAUUCGUGCUGUCU   1   |||||||*|||*|||||||||||| targets:382   CUCCCUUCCCAGAAGCACGACAGA   405 Target Full Sequence	2.5	PREDICTED: Zea mays RNA-directed DNA polymerase (reverse transcriptase) (LOC103629684), transcript variant X1, mRNA	NA	coding protein	psRNATarget