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BaseInfo

ncRNA ID novel_zma_miR3263
Species Zea mays
Class miRNA
Genome position Chr5:29802051-29802149 [+]
Reference genome RefGen_v4
Source SRR2089715;SRR5451003;SRR2089708
Length 24
Mature sequence(if miRNA) 76 - ACGGGUAGAAUUUUUUUGAUGGGU - 99
Stem-loop(if miRNA) --   A    U     --       G     ACGAGUAU   UAAGAUUUUAUA
  CCA CAAG AAAAU  UACCCGU CGGGU        GGG            C
  ||| |||| |||||  ||||||| |||||        |||
  GGU GUUU UUUUA  AUGGGCA GCCCA        GGU            C
UG   A    -     AG       -     -----AUG   AUAUACCAGCGC
Stem-loop sequence CCAACAAGUAAAAUUACCCGUGCGGGUACGAGUAUGGGUAAGAUUUUAUACCCGCGACCAUAUAUGGGUAACCCGACGGGUAGAAUUUUUUUGAUGGGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU943209.1
ncRNA:24   UGGGUAGUUUUUUUAAGAUGGGCA   1
  |*=|||||*|||||||||||=|||
targets:1358   AAUCAUCAUAAAAAUUCUACUCGU   1381

2.5 Zea mays clone 1587365 mRNA sequence NA coding protein psRNATarget