ncRNA ID | novel_zma_miR3243 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:586361-586579 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089715;SRR2287160;SRR2287162;SRR2287163;SRR2287164;SRR1997865;SRR5100248;SRR2089699;SRR2089700;SRR2089701;SRR2089702;SRR2089703;SRR2089707 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUAGACCCGAAUAGUAGAGAGACU - 24 |
Stem-loop(if miRNA) |
-AUA        UA        --AC      CUUU    -CAAA     --ACA      -A    A        ---A        ----A  ACAAGUGACUAUAAAAAGAU     GACCCGAA  GUAGAGAG    UAGUAU    UGUU     UAUAU     AUGAAU  AUUA UUGGAAGU    GUAUUAUU     CA                    A     ||||||||  ||||||||    ||||||    ||||     |||||     ||||||  |||| ||||||||    ||||||||     ||                    G     UUGGGUUU  UAUUUUUC    AUUAUA    ACAA     AUAUA     UACUUG  UAAU GAUUUUUA    UAUAGUAG     CU                    U CUUA        UA        GAGA      CACU    UAAUA     CUAAA      AA    C        AUAC        AAUUG  AUCAUAUAUAUAGAGAUAUA |
Stem-loop sequence | AUAGACCCGAAUAGUAGAGAGACUAGUAUCUUUUGUUCAAAUAUAUACAAUGAAUAAUUAAUUGGAAGUAGUAUUAUUACAACAAGUGACUAUAAAAAGAUAGUAUAUAGAGAUAUAUAUACUAUCGUUAAGAUGAUAUCAUAAUUUUUAGCUAAUAAGUUCAUAAAUCAUAUAAUAAUAACAUCACAUAUUAAGAGCUUUUUAUAUUUUGGGUUAUUC |