ncRNA ID | novel_zma_miR3239 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr10:68482338-68482453 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089715 |
Length | 20 |
Mature sequence(if miRNA) | 1 - UUUGCCAAGUGUCAGACGUU - 20 |
Stem-loop(if miRNA) |
--      A        ACGUU      C A    U UC       C        ACC   UUUGCC AGUGUCAG     GGCACU G CAAA U  UUUUUUG CGAGUGUU   U   |||||| ||||||||     |||||| | |||| |  ||||||| ||||||||   AAACGG UCACAGUU     CUGUGA C GUUU A  AAAAAAU GCUCACAA   G UG      C        CCUUU      A C    U UA       A        ACA |
Stem-loop sequence | UUUGCCAAGUGUCAGACGUUGGCACUCGACAAAUUUCUUUUUUGCCGAGUGUUACCUGACAAACACUCGAUAAAAAAAUAUUUUGCCAAGUGUCUUUCCUUGACACUCGGCAAAGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT063684.1 |
|
2.5 | Zea mays full-length cDNA clone ZM_BFc0094N19 mRNA, complete cds | NA | coding protein | psRNATarget | |||||||||
NM_001175015.1 |
|
2.5 | Zea mays uncharacterized LOC100382263 (LOC100382263), mRNA | NA | coding protein | psRNATarget |