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BaseInfo

ncRNA ID novel_zma_miR3231
Species Zea mays
Class miRNA
Genome position Chr4:102207880-102207927 [-]
Reference genome RefGen_v4
Source SRR2089715
Length 24
Mature sequence(if miRNA) 25 - AUCUACAGGGUUGUCUGAUGUCCG - 48
Stem-loop(if miRNA) --        GGU     -G    C
  AUCUACAG   UGUCU  AUGU C
  ||||||||   |||||  |||| G
  UGGAUGUC   ACAGG  UACG U
GG        --A     AG    U
Stem-loop sequence AUCUACAGGGUUGUCUGAUGUCCGUUGCAUGAGGACAACUGUAGGUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU943317.1
ncRNA:24   GCCUGUAGUCUGUUGGGACAUCUA   1
  *||||*|==|||||||||||||||
targets:845   GGGACUUUGGACAACCCUGUAGAU   868

3.0 Zea mays clone 1597341 mRNA sequence NA coding protein psRNATarget