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BaseInfo

ncRNA ID novel_zma_miR3227
Species Zea mays
Class miRNA
Genome position Chr1:128873298-128873355 [+]
Reference genome RefGen_v4
Source SRR1583944
Length 25
Mature sequence(if miRNA) 1 - GCGAUUACAAGUCAGUGUGAACAGU - 25
Stem-loop(if miRNA) --   A        C  U          CG
  GCG UUACAAGU AG GUGAACAGUA  G
  ||| |||||||| || ||||||||||
  CGC GAUGUUUA UC UACUUGUCAU  U
GA   G        -  -          UG
Stem-loop sequence GCGAUUACAAGUCAGUGUGAACAGUACGGUGUUACUGUUCAUCUAUUUGUAGGCGCAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU957128.1
ncRNA:25   UGACAAGUGUGACUGAACAUUAGCG   1
  |||||||||=|||||||||||||*|
targets:1940   ACUGUUCACGCUGACUUGUAAUCAC   1964

2.5 Zea mays clone 1583646 hypothetical protein mRNA, complete cds NA coding protein psRNATarget