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BaseInfo

ncRNA ID novel_zma_miR3226
Species Zea mays
Class miRNA
Genome position Chr4:157977034-157977104 [-]
Reference genome RefGen_v4
Source SRR2089715
Length 23
Mature sequence(if miRNA) 1 - GAUUAAAUAAUUCCCGUCGGCCC - 23
Stem-loop(if miRNA) --              A       CC       AG
  GCCGACGGGGAUUA UUAAUUU  GUCGGCU  A
  |||||||||||||| |||||||  |||||||  A
  CGGCUGCCCUUAAU AAUUAGG  CAGCCGG  U
CC              A       AA       AA
Stem-loop sequence GCCGACGGGGAUUAAUUAAUUUCCGUCGGCUAGAAUAAGGCCGACAAGGAUUAAAUAAUUCCCGUCGGCCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020551996.1
ncRNA:23   CCCGGCUGCCCUUAAUAAAUUAG   1
  *|||||||||||=||||||||||
targets:395   CGGCCGACGGGAGUUAUUUAAUC   417

1.5 PREDICTED: Zea mays glycine-rich protein 2-like (LOC109945681), mRNA NA coding protein psRNATarget