ncRNA ID | osa-miR156f-3p |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr8:21478230-21478415 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 22 |
Mature sequence(if miRNA) | 164 - GCUCACUUCUCUUUCUGUCAGC - 185 |
Stem-loop(if miRNA) |
           -    -        A       C  A   -  -  GAUCUAUCAAUCUUCCCUUCGACAGGAUAGCUAGAUAGAAAGAAAGAGA AGUUGACAGAA GAGA GUGAGCAC CAGCGGC AG CUG CA UC                                                 G ||||||||||| |||| |||||||| ||||||| || ||| || || UCGACUGUCUU CUCU CACUCGUG GUCGCCG UC GAC UA UA                                                 G            U    U        C       -  -   A  G  GUAGUAGUAAAGUAGAGAGAGAGAGAGAGAGAAGGUACCGGCGGCUGCC |
Stem-loop sequence | AGUUGACAGAAGAGAGUGAGCACACAGCGGCCAGACUGCAUCGAUCUAUCAAUCUUCCCUUCGACAGGAUAGCUAGAUAGAAAGAAAGAGAGGCCGUCGGCGGCCAUGGAAGAGAGAGAGAGAGAGAGAUGAAAUGAUGAUGAUGAUACAGCUGCCGCUGCGUGCUCACUUCUCUUUCUGUCAGCU |
1 | PMID:12101121
"MicroRNAs in plants"; Reinhart BJ, Weinstein EG, Rhoades MW, Bartel B, Bartel DP; Genes Dev. 16:1616-1626(2002). |
2 | PMID:21901091
"Viral infection induces expression of novel phased microRNAs from conserved cellular microRNA precursors"; Du P, Wu J, Zhang J, Zhao S, Zheng H, Gao G, Wei L, Li Y; PLoS Pathog. 7:e1002176(2011). |