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BaseInfo

ncRNA ID	novel_zma_miR3216
Species	Zea mays
Class	miRNA
Genome position	Chr4:220057239-220057329 [+]
Reference genome	RefGen_v4
Source	SRR2089715
Length	24
Mature sequence(if miRNA)	1 - AUACCGGAGAGGAUUGGAGAGGCU - 24
Stem-loop(if miRNA)	-AU       A  A      A         CCC           A    ACCGGAG GG UUGGAG GGCUAAAAU   CUCCUUAUUUA A    ||||||| || |||||| |||||||||   |||||||||||    UGGCUUC CC AACCUC CCGAUUUUA   GAGGAAUAAGU A UUU       C  C      C         AAC           U
Stem-loop sequence	AUACCGGAGAGGAUUGGAGAGGCUAAAAUCCCCUCCUUAUUUAAAAUUGAAUAAGGAGCAAAUUUUAGCCCCUCCAACCCCCUUCGGUUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020539411.1	ncRNA:24   UCGGAGAGGUUAGGAGAGGCCAUA   1   ||||*|||||||||*||||||||| targets:3501   AGCCCCUCCAAUCCCCUCCGGUAU   3524 Target Full Sequence	1.5	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_020539397.1	ncRNA:24   UCGGAGAGGUUAGGAGAGGCCAUA   1   ||||*|||||||||*||||||||| targets:3536   AGCCCCUCCAAUCCCCUCCGGUAU   3559 Target Full Sequence	1.5	PREDICTED: Zea mays Protein kinase superfamily protein (LOC100502407), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008664337.2	ncRNA:24   UCGGAGAGGUUAGGAGAGGCCAUA   1   |*=|||||||||||||||||||*| targets:2085   AUUCUCUCCAAUCCUCUCCGGUUU   2108 Target Full Sequence	1.5	PREDICTED: Zea mays ABC transporter F family member 1 (LOC103640881), mRNA	NA	coding protein	psRNATarget
AY110186.1	ncRNA:24   UCGGAGAGGUUAGGAGAGGCCAUA   1   ||=**||==||||||||||||||| targets:938   AGUGACUUUAAUCCUCUCCGGUAU   961 Target Full Sequence	2.0	Zea mays CL142_1 mRNA sequence	NA	coding protein	psRNATarget
EU949300.1	ncRNA:24   UCGGAGAGGUUAGGAGAGGCCAUA   1   ||=**||==||||||||||||||| targets:938   AGUGACUUUAAUCCUCUCCGGUAU   961 Target Full Sequence	2.0	Zea mays clone 400899 mRNA sequence	NA	coding protein	psRNATarget
XM_008667867.1	ncRNA:24   UCGGAGAGGUUAGGAGAGGCCAUA   1   |*||*|||||||||*||||||||| targets:1032   AACCCCUCCAAUCCCCUCCGGUAU   1055 Target Full Sequence	1.5	PREDICTED: Zea mays 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (LOC103644703), mRNA	NA	coding protein	psRNATarget