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BaseInfo

ncRNA ID novel_zma_miR3214
Species Zea mays
Class miRNA
Genome position Chr4:200938835-200938934 [+]
Reference genome RefGen_v4
Source SRR2089715
Length 24
Mature sequence(if miRNA) 1 - AAUGUUAUUUACACUGGCGGGCUG - 24
Stem-loop(if miRNA) --     U    A               AA     A     A   AU   
  AAUGU AUUU CACUGGCGGGCUGCU  AGAAA CCGCC GUG  AAUC
  ||||| |||| |||||||||||||||  ||||| ||||| |||  |||A
  UUGUA UAAA GUGACCGUCCGACGA  UCUUU GGCGG CAC  UUGU
CU     C    A               AA     -     A   CU   
Stem-loop sequence AAUGUUAUUUACACUGGCGGGCUGCUAAAGAAAACCGCCAGUGAUAAUCAUGUUUCCACAGGCGGUUUCUAAAGCAGCCUGCCAGUGAAAAUCAUGUUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ107356.1
ncRNA:24   GUCGGGCGGUCACAUUUAUUGUAA   1
  ||--|=|=|||||||||||||||*
targets:73   CA--CUGUCAGUGUAAAUAACAUC   94

3.0 TSA: Zea mays contig43014, mRNA sequence NA coding protein psRNATarget