ncRNA ID | novel_zma_miR3214 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:200938835-200938934 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089715 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AAUGUUAUUUACACUGGCGGGCUG - 24 |
Stem-loop(if miRNA) |
--     U    A               AA     A     A   AU      AAUGU AUUU CACUGGCGGGCUGCU  AGAAA CCGCC GUG  AAUC   ||||| |||| |||||||||||||||  ||||| ||||| |||  |||A   UUGUA UAAA GUGACCGUCCGACGA  UCUUU GGCGG CAC  UUGU CU     C    A               AA     -     A   CU    |
Stem-loop sequence | AAUGUUAUUUACACUGGCGGGCUGCUAAAGAAAACCGCCAGUGAUAAUCAUGUUUCCACAGGCGGUUUCUAAAGCAGCCUGCCAGUGAAAAUCAUGUUUC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EZ107356.1 |
|
3.0 | TSA: Zea mays contig43014, mRNA sequence | NA | coding protein | psRNATarget |