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BaseInfo

ncRNA ID novel_zma_miR3210
Species Zea mays
Class miRNA
Genome position Chr4:147759758-147759839 [+]
Reference genome RefGen_v4
Source SRR2089715
Length 24
Mature sequence(if miRNA) 59 - GAAGUACUCGGCAAAGAAAAGCAG - 82
Stem-loop(if miRNA) --  -C                    CUCG            A
  GC  UUCUUUGCCGAGUACUUUUU    GGCACUCGGCAA G
  ||  ||||||||||||||||||||    |||||||||||| A
  CG  AAGAAACGGCUCAUGAAGGA    CCGUGAGUCGUU C
GA  AA                    ----            U
Stem-loop sequence GCCUUCUUUGCCGAGUACUUUUUCUCGGGCACUCGGCAAAGACUUUGCUGAGUGCCAGGAAGUACUCGGCAAAGAAAAGCAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI407253.1
ncRNA:24   GACGAAAAGAAACGGCUCAUGAAG   1
  ******|||||||||||||||||=
targets:28   AAAGCCUUCUUUGCCGAGUACUUU   51

2.0 Sequence 5378 from Patent EP2074227 NA coding protein psRNATarget
LQ239383.1
ncRNA:24   GACGAAAAGAAACGGCUCAUGAAG   1
  ******|||||||||||||||||=
targets:28   AAAGCCUUCUUUGCCGAGUACUUU   51

2.0 Sequence 5378 from Patent EP2985353 NA coding protein psRNATarget
JB167714.1
ncRNA:24   GACGAAAAGAAACGGCUCAUGAAG   1
  ******|||||||||||||||||=
targets:28   AAAGCCUUCUUUGCCGAGUACUUU   51

2.0 Sequence 5378 from Patent EP2559767 NA coding protein psRNATarget