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BaseInfo

ncRNA ID novel_zma_miR3203
Species Zea mays
Class miRNA
Genome position Chr10:18606079-18606151 [-]
Reference genome RefGen_v4
Source SRR2089715;SRR5451004
Length 22
Mature sequence(if miRNA) 52 - AAGGGAGUGUUAGAUGGUCAGU - 73
Stem-loop(if miRNA) --   G       AGA    -     ---G    UA    A
  AAG GAGUGUU   UGGU CAGUU    UAUU  AUUA U
  ||| |||||||   |||| |||||    ||||  ||||
  UUC UUCACAG   AUCA GUCGA    AUAG  UAAU U
AA   G       ---    A     AGCA    --    U
Stem-loop sequence AAGGGAGUGUUAGAUGGUCAGUUGUAUUUAAUUAAUUUUAAUGAUAACGAAGCUGAACUAGACACUUGCUUAA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI409670.1
ncRNA:22   UGACUGGUAGAUUGUGAGGGAA   1
  =||||||*||||||||*|||||
targets:51   GCUGACCCUCUAACACACCCUU   72

2.5 Sequence 7795 from Patent EP2074227 NA coding protein psRNATarget
JB170131.1
ncRNA:22   UGACUGGUAGAUUGUGAGGGAA   1
  =||||||*||||||||*|||||
targets:51   GCUGACCCUCUAACACACCCUU   72

2.5 Sequence 7795 from Patent EP2559767 NA coding protein psRNATarget
LQ241800.1
ncRNA:22   UGACUGGUAGAUUGUGAGGGAA   1
  =||||||*||||||||*|||||
targets:51   GCUGACCCUCUAACACACCCUU   72

2.5 Sequence 7795 from Patent EP2985353 NA coding protein psRNATarget
LQ241272.1
ncRNA:22   UGACUGGUAGAUUGUGAGGGAA   1
  =||||||*||||||||*|||||
targets:52   GCUGACCCUCUAACACACCCUU   73

2.5 Sequence 7267 from Patent EP2985353 NA coding protein psRNATarget
LQ242340.1
ncRNA:22   UGACUGGUAGAUUGUGAGGGAA   1
  =||||||*||||||||*|||||
targets:52   GCUGACCCUCUAACACACCCUU   73

2.5 Sequence 8335 from Patent EP2985353 NA coding protein psRNATarget
HI409142.1
ncRNA:22   UGACUGGUAGAUUGUGAGGGAA   1
  =||||||*||||||||*|||||
targets:52   GCUGACCCUCUAACACACCCUU   73

2.5 Sequence 7267 from Patent EP2074227 NA coding protein psRNATarget
HI410210.1
ncRNA:22   UGACUGGUAGAUUGUGAGGGAA   1
  =||||||*||||||||*|||||
targets:52   GCUGACCCUCUAACACACCCUU   73

2.5 Sequence 8335 from Patent EP2074227 NA coding protein psRNATarget
JB169603.1
ncRNA:22   UGACUGGUAGAUUGUGAGGGAA   1
  =||||||*||||||||*|||||
targets:52   GCUGACCCUCUAACACACCCUU   73

2.5 Sequence 7267 from Patent EP2559767 NA coding protein psRNATarget
JB170671.1
ncRNA:22   UGACUGGUAGAUUGUGAGGGAA   1
  =||||||*||||||||*|||||
targets:52   GCUGACCCUCUAACACACCCUU   73

2.5 Sequence 8335 from Patent EP2559767 NA coding protein psRNATarget