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BaseInfo

ncRNA ID	novel_zma_miR3201
Species	Zea mays
Class	miRNA
Genome position	Chr7:27094095-27094150 [-]
Reference genome	RefGen_v4
Source	SRR1583944
Length	24
Mature sequence(if miRNA)	33 - AGAUCUAUAUAUAUAUGUUUGUGU - 56
Stem-loop(if miRNA)	--A  UC                 GUGU    GA  UAUAUAUAUAUGUUUGU    G    ||  |||||||||||||||||    CU  AUAUAUAUAUAUAAAUA    U UGA  UA                 AAUG
Stem-loop sequence	AGAUCUAUAUAUAUAUGUUUGUGUGUGUGUAAAUAAAUAUAUAUAUAUAAUUCAGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT035808.1	ncRNA:24   UGUG-UUUGUAUAUAUAUAUCUAGA   1   |||=-|||=|||||||||||*|||| targets:448   ACAUGAAAUAUAUAUAUAUAUAUCU   472 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0084B13 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008683381.2	ncRNA:24   UGUGUUUGUAUAUAUAUAUCUAGA   1   ||===*|||*|||||||||||||| targets:104   ACGUGUACACAUAUAUAUAGAUCU   127 Target Full Sequence	2.0	PREDICTED: Zea mays Dof zinc finger protein DOF2.5 (DOF22), transcript variant X2, mRNA	NA	coding protein	psRNATarget
EU957225.1	ncRNA:24   UGUGUUUGUAUAUAUAUAUCUAGA   1   |*=*||||||||||||||||*||| targets:597   AAGGAAACAUAUAUAUAUAGUUCU   620 Target Full Sequence	1.5	Zea mays clone 1586183 mRNA sequence	NA	coding protein	psRNATarget