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BaseInfo

ncRNA ID novel_zma_miR3200
Species Zea mays
Class miRNA
Genome position Chr3:20812235-20812306 [-]
Reference genome RefGen_v4
Source SRR2089715;SRR2089706
Length 24
Mature sequence(if miRNA) 49 - GUGCUCCUGCACCAGGUCGCGGAC - 72
Stem-loop(if miRNA) --      -   CAC    U       C   --     
  GUGCUC CUG   CAGG CGCGGAC GUC  CGGCCC
  |||||| |||   |||| ||||||| |||  |||||C
  CACGAG GAC   GUCC GCGCCUG CAG  GCCGGU
GC      A   -CA    -       C   AC     
Stem-loop sequence GUGCUCCUGCACCAGGUCGCGGACCGUCCGGCCCCUGGCCGCAGACCGUCCGCGCCUGACCAGAGAGCACCG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU968855.1
ncRNA:24   CAGGCGCUGGACCACGUCCUCGUG   1
  ||||||||||||||||||||||*|
targets:730   GUCCGCGACCUGGUGCAGGAGCUC   753

1.5 Zea mays clone 324570 mRNA sequence NA coding protein psRNATarget