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BaseInfo

ncRNA ID novel_zma_miR3193
Species Zea mays
Class miRNA
Genome position Chr3:115506322-115506382 [-]
Reference genome RefGen_v4
Source SRR2089715
Length 24
Mature sequence(if miRNA) 1 - UUAUUUUCGUCGGCCUGGAUGCGG - 24
Stem-loop(if miRNA) --U    A               CA     G
   CAUU AGGCCGACGAAAAUA  GGUCG U
   |||| |||||||||||||||  ||||| U
   GUAG UCCGGCUGCUUUUAU  UCAGU A
GGC    G               --     A
Stem-loop sequence UCAUUAAGGCCGACGAAAAUACAGGUCGGUUAAUGACUUAUUUUCGUCGGCCUGGAUGCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020543196.1
ncRNA:24   GGCGUAGGUCCGGCUGCUUUUAUU   1
  ||*|||||||*||||||||||||*
targets:63   CCUCAUCCAGACCGACGAAAAUAU   86

2.0 PREDICTED: Zea mays transcriptional regulatory protein AlgP-like (LOC109941932), mRNA NA coding protein psRNATarget
XM_020541648.1
ncRNA:24   GGCGUAGGUCCGGCUGCUUUUAUU   1
  ||**|*=||||||||||||||||*
targets:136   CCUAAAUCAGGCCGACGAAAAUAC   159

3.0 PREDICTED: Zea mays extensin-like (LOC103634127), mRNA NA coding protein psRNATarget