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BaseInfo

ncRNA ID	novel_zma_miR3184
Species	Zea mays
Class	miRNA
Genome position	Chr7:103222617-103222678 [-]
Reference genome	RefGen_v4
Source	SRR1583944
Length	24
Mature sequence(if miRNA)	39 - AUAGCACUCGGCAGAGAAGCAAUA - 62
Stem-loop(if miRNA)	--   G                A   C U G   AUA CACUCGGCAGAGAAGC AUA C G G   ||| |||||||||||||||| ||| | |   UGU GUGAGCUGUUUCUUCG UAU G C C GG   A                A   U C A
Stem-loop sequence	AUAGCACUCGGCAGAGAAGCAAUACCUGGGCACCGUUAUAGCUUCUUUGUCGAGUGAUGUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ239157.1	ncRNA:24   AUAACGAAGAGACGGCUCACGAUA   1   |*|||*||||=||||||||||||| targets:49   UCUUGGUUCUUUGCCGAGUGCUAU   72 Target Full Sequence	2.0	Sequence 5152 from Patent EP2985353	NA	coding protein	psRNATarget
JB167488.1	ncRNA:24   AUAACGAAGAGACGGCUCACGAUA   1   |*|||*||||=||||||||||||| targets:49   UCUUGGUUCUUUGCCGAGUGCUAU   72 Target Full Sequence	2.0	Sequence 5152 from Patent EP2559767	NA	coding protein	psRNATarget
HI407027.1	ncRNA:24   AUAACGAAGAGACGGCUCACGAUA   1   |*|||*||||=||||||||||||| targets:49   UCUUGGUUCUUUGCCGAGUGCUAU   72 Target Full Sequence	2.0	Sequence 5152 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238769.1	ncRNA:24   AUAACGAAGAGACGGCUCACGAUA   1   ***|||||||=||||||||||*|| targets:163   GCGUGCUUCUUUGCCGAGUGCCAU   186 Target Full Sequence	2.5	Sequence 4764 from Patent EP2985353	NA	coding protein	psRNATarget
JB167100.1	ncRNA:24   AUAACGAAGAGACGGCUCACGAUA   1   ***|||||||=||||||||||*|| targets:163   GCGUGCUUCUUUGCCGAGUGCCAU   186 Target Full Sequence	2.5	Sequence 4764 from Patent EP2559767	NA	coding protein	psRNATarget
HI406639.1	ncRNA:24   AUAACGAAGAGACGGCUCACGAUA   1   ***|||||||=||||||||||*|| targets:163   GCGUGCUUCUUUGCCGAGUGCCAU   186 Target Full Sequence	2.5	Sequence 4764 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239197.1	ncRNA:24   AUAACGAAGAGACGGCUCACGAUA   1   *|||-|*|||=||||||||||||| targets:11   GAUU-CGUCUUUGCCGAGUGCUAU   33 Target Full Sequence	2.0	Sequence 5192 from Patent EP2985353	NA	coding protein	psRNATarget
HI407067.1	ncRNA:24   AUAACGAAGAGACGGCUCACGAUA   1   *|||-|*|||=||||||||||||| targets:11   GAUU-CGUCUUUGCCGAGUGCUAU   33 Target Full Sequence	2.0	Sequence 5192 from Patent EP2074227	NA	coding protein	psRNATarget
JB167528.1	ncRNA:24   AUAACGAAGAGACGGCUCACGAUA   1   *|||-|*|||=||||||||||||| targets:11   GAUU-CGUCUUUGCCGAGUGCUAU   33 Target Full Sequence	2.0	Sequence 5192 from Patent EP2559767	NA	coding protein	psRNATarget
JB167204.1	ncRNA:24   AUAACGAAGAGACGGCUCACGAUA   1   ||**||||||=|*||||||||||| targets:40   UAAAGCUUCUUUACCGAGUGCUAU   63 Target Full Sequence	2.5	Sequence 4868 from Patent EP2559767	NA	coding protein	psRNATarget
HI406743.1	ncRNA:24   AUAACGAAGAGACGGCUCACGAUA   1   ||**||||||=|*||||||||||| targets:40   UAAAGCUUCUUUACCGAGUGCUAU   63 Target Full Sequence	2.5	Sequence 4868 from Patent EP2074227	NA	coding protein	psRNATarget
LQ238873.1	ncRNA:24   AUAACGAAGAGACGGCUCACGAUA   1   ||**||||||=|*||||||||||| targets:40   UAAAGCUUCUUUACCGAGUGCUAU   63 Target Full Sequence	2.5	Sequence 4868 from Patent EP2985353	NA	coding protein	psRNATarget
XM_008666540.2	ncRNA:24   AUAACGAAGAGACGGCUCACGAUA   1   ||--||||*|||||=||||||||| targets:2112   UA--GCUUGUCUGCUGAGUGCUAU   2133 Target Full Sequence	2.5	PREDICTED: Zea mays zinc finger CCCH domain-containing protein 44 (LOC103643376), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008666539.2	ncRNA:24   AUAACGAAGAGACGGCUCACGAUA   1   ||--||||*|||||=||||||||| targets:2850   UA--GCUUGUCUGCUGAGUGCUAU   2871 Target Full Sequence	2.5	PREDICTED: Zea mays zinc finger CCCH domain-containing protein 44 (LOC103643376), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008666538.2	ncRNA:24   AUAACGAAGAGACGGCUCACGAUA   1   ||--||||*|||||=||||||||| targets:2856   UA--GCUUGUCUGCUGAGUGCUAU   2877 Target Full Sequence	2.5	PREDICTED: Zea mays zinc finger CCCH domain-containing protein 44 (LOC103643376), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020546734.1	ncRNA:24   AUAACGAAGAGACGGCUCACGAUA   1   ||--||||*|||||=||||||||| targets:2937   UA--GCUUGUCUGCUGAGUGCUAU   2958 Target Full Sequence	2.5	PREDICTED: Zea mays zinc finger CCCH domain-containing protein 44 (LOC103643376), transcript variant X4, mRNA	NA	coding protein	psRNATarget