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BaseInfo

ncRNA ID	novel_zma_miR3172
Species	Zea mays
Class	miRNA
Genome position	Chr3:136339794-136339843 [+]
Reference genome	RefGen_v4
Source	SRR2089715;SRR2089706
Length	24
Mature sequence(if miRNA)	27 - ACUGGUUCUGGAACCCGAGAUGGA - 50
Stem-loop(if miRNA)	--         CG    -UU     G   CAUCUUGGG  UCCA   UUAGU C   |||||||||  ||||   |||||   GUAGAGCCC  AGGU   GGUCA A AG         -A    CUU     G
Stem-loop sequence	CAUCUUGGGCGUCCAUUUUAGUGCAGACUGGUUCUGGAACCCGAGAUGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT036284.1	ncRNA:24   AGGUAGAGCCCAAGGUCUUGGUCA   1   ||=||||||||||||||=|||||| targets:428   UCUAUCUCGGGUUCCAGGACCAGU   451 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0104O09 mRNA, complete cds	NA	coding protein	psRNATarget
EU972514.1	ncRNA:24   AGGUAGAGCCCAAGGUCUUGGUCA   1   ||=||||||||||||||=|||||| targets:684   UCUAUCUCGGGUUCCAGGACCAGU   707 Target Full Sequence	1.5	Zea mays clone 382551 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
BT039435.1	ncRNA:24   AGGUAGAGCCCAAGGUCUUGGUCA   1   ||=||||||||||||||=|||||| targets:777   UCUAUCUCGGGUUCCAGGACCAGU   800 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0013G13 mRNA, complete cds	NA	coding protein	psRNATarget
BT086630.1	ncRNA:24   AGGUAGAGCCCAAGGUCUUGGUCA   1   ||=||||=|||||||||=|||||| targets:280   UCUAUCUUGGGUUCCAGGACCAGU   303 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFa0066I05 mRNA, complete cds	NA	coding protein	psRNATarget