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BaseInfo

ncRNA ID	novel_zma_miR3163
Species	Zea mays
Class	miRNA
Genome position	Chr2:14852913-14852979 [-]
Reference genome	RefGen_v4
Source	SRR2089715;SRR2089702;SRR2089707
Length	23
Mature sequence(if miRNA)	1 - GGUUAGGGGUGGAUUGAUGGGGA - 23
Stem-loop(if miRNA)	--   U                          C   CCC UCAAUCCACCCCUAAUCGAACAAGUU U   ||| |||||||||||||||||||||||||| A   GGG AGUUAGGUGGGGAUUGGCUUGUUCAG A AG   U                          A
Stem-loop sequence	CCCUUCAAUCCACCCCUAAUCGAACAAGUUCUAAAGACUUGUUCGGUUAGGGGUGGAUUGAUGGGGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020552749.1	ncRNA:23   AGGGGUAGUUAGGUGGGGAUUGG   1   |||||*||||||||||||||||| targets:3283   UCCCCCUCAAUCCACCCCUAACC   3305 Target Full Sequence	1.0	PREDICTED: Zea mays uncharacterized LOC103654236 (LOC103654236), mRNA	NA	coding protein	psRNATarget
XM_008661613.2	ncRNA:23   AGGGGUAGUUAGGUGGGGAUUGG   1   ||||=*||||||||||||||||| targets:3051   UCCCUCUCAAUCCACCCCUAACC   3073 Target Full Sequence	2.0	PREDICTED: Zea mays two-component response regulator ORR25 (LOC103638799), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008661611.2	ncRNA:23   AGGGGUAGUUAGGUGGGGAUUGG   1   ||||=*||||||||||||||||| targets:3056   UCCCUCUCAAUCCACCCCUAACC   3078 Target Full Sequence	2.0	PREDICTED: Zea mays two-component response regulator ORR25 (LOC103638799), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT083705.1	ncRNA:23   AGGGGUAGUUAGGUGGGGAUUGG   1   |=|=|||=|||||||||*||||| targets:1855   UUCUCAUUAAUCCACCCAUAACC   1877 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0030D06 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001350330.1	ncRNA:23   AGGGGUAGUUAGGUGGGGAUUGG   1   |=|=|||=|||||||||*||||| targets:5663   UUCUCAUUAAUCCACCCAUAACC   5685 Target Full Sequence	2.5	Zea mays uncharacterized LOC100191405 (LOC100191405), mRNA	NA	coding protein	psRNATarget