ncRNA ID | novel_zma_miR3154 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:82244737-82244901 [-] |
Reference genome | RefGen_v4 |
Source | SRR1583941;SRR1583942 |
Length | 22 |
Mature sequence(if miRNA) | 1 - AAGUUGGGCUAGACUUCGGUUU - 22 |
Stem-loop(if miRNA) |
--   AU  U    -   A  --G      ----  G  AAGG UA    -    AG         U  G UUU   C  UCA    --       ACC  GG GUCU GCC CA   UGCCUG    GG CG    G  GCGC UCUC  AGCUGGCGG GA A   CGG GC   CCGC  CGUCA   |||  || |||| ||| ||   ||||||    || ||    |  |||| ||||  ||||||||| || |   ||| ||   ||||  ||||A   UGG  CU CAGA CGG GU   AUGGAC    UC GC    C  UGCG AGGG  UCGGCCGCC CU U   GUC CG   GGCG  GCAGG UU   --  U    U   -  UGA      UGAA  G  --GA GC    G    AG         -  G ---   A  ---    AA     |
Stem-loop sequence | ACCAUGGUGUCUGCCACAGUGCCUGGGGCGAAGGGUAGCGCUCUCAGAGCUGGCGGUGAGAUUUCGGCGCUCACCGCCGUCAAGGACGAAGCGGGCACUGUGUCCCGCCGGCUGAGGGAGGCGUCGCAGCGGCUAAGUCAGGUAAGUUGGGCUAGACUUCGGUUU |