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BaseInfo

ncRNA ID novel_zma_miR3154
Species Zea mays
Class miRNA
Genome position Chr6:82244737-82244901 [-]
Reference genome RefGen_v4
Source SRR1583941;SRR1583942
Length 22
Mature sequence(if miRNA) 1 - AAGUUGGGCUAGACUUCGGUUU - 22
Stem-loop(if miRNA) --   AU  U    -   A  --G      ----  G  AAGG UA    -    AG         U  G UUU   C  UCA    --    
  ACC  GG GUCU GCC CA   UGCCUG    GG CG    G  GCGC UCUC  AGCUGGCGG GA A   CGG GC   CCGC  CGUCA
  |||  || |||| ||| ||   ||||||    || ||    |  |||| ||||  ||||||||| || |   ||| ||   ||||  ||||A
  UGG  CU CAGA CGG GU   AUGGAC    UC GC    C  UGCG AGGG  UCGGCCGCC CU U   GUC CG   GGCG  GCAGG
UU   --  U    U   -  UGA      UGAA  G  --GA GC    G    AG         -  G ---   A  ---    AA    
Stem-loop sequence ACCAUGGUGUCUGCCACAGUGCCUGGGGCGAAGGGUAGCGCUCUCAGAGCUGGCGGUGAGAUUUCGGCGCUCACCGCCGUCAAGGACGAAGCGGGCACUGUGUCCCGCCGGCUGAGGGAGGCGUCGCAGCGGCUAAGUCAGGUAAGUUGGGCUAGACUUCGGUUU