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BaseInfo

ncRNA ID	osa-miR5073
Species	Oryza sativa
Class	miRNA
Genome position	Chr8:19020495-19020601 [+]
Reference genome	MSU7
Source	miRBase
Length	23
Mature sequence(if miRNA)	11 - GUUUGGUGAAUCGGAAACUAUUU - 33
Stem-loop(if miRNA)	--AUA   AUUA      U   -U           UUUCAAUU        AAAGU      AGA    GUUUGG GAA  CGGAAACUAUU        UUAUAGAA     C      |||    |||||| |||  |||||||||||        ||||||||     C      UCU    CAAACC CUU  GCUUUUGAUAA        AGUAUUUU     A UCAAA   --GC      C   UU           ---UAACU        AAUGU
Stem-loop sequence	AUAAGAAUUAGUUUGGUGAAUCGGAAACUAUUUUUCAAUUUUAUAGAAAAAGUCCAUGUAAUUUUAUGAUCAAUAAUAGUUUUCGUUUUCCCCAAACCGUCUAAACU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK289135.1	ncRNA:23   UUUAUCAAAGGCUAAGUGGUUUG   1   |||*||||||||||||||||||| targets:358   AAAAAGUUUCCGAUUCACCAAAC   380 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090099C01, full insert sequence	NA	coding protein	psRNATarget

Reference

1	PMID:21352554 "Discovery of barley miRNAs through deep sequencing of short reads"; Schreiber AW, Shi BJ, Huang CY, Langridge P, Baumann U; BMC Genomics. 12:129(2011).