ncRNA ID | novel_zma_miR3147 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:202742014-202742231 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089714;SRR2089702 |
Length | 21 |
Mature sequence(if miRNA) | 1 - UGUGGCAUGGAUCAAGAUCGU - 21 |
Stem-loop(if miRNA) |
--A    C   G         C   UC  C        G G            AU   GG                  UC  -U  -C   -  -CA      GGU    U    AUCU GAU CAUGCUACA GUC  UG GUACUAAU U AAACUAGAUCAA  CUU  CACGUUUAGGAGCCAGUG  CC  GC  CAG GC   UCGAUA   CGAC C    |||| ||| ||||||||| |||  || |||||||| | ||||||||||||  |||  ||||||||||||||||||  ||  ||  ||| ||   ||||||   |||| C    UAGA CUA GUACGGUGU CGG  AC CGUGGUUA A UUUGAUCUAGUU  GAA  GUGCAAAUUCUCGGUCAC  GG  CG  GUC CG   GGUUAU   GUUG A UGC    A   G         A   GA  A        G G            CG   GG                  UC  UU  AU   U  AUC      -AU    U |
Stem-loop sequence | AAUCUCGAUGCAUGCUACACGUCUCUGCGUACUAAUGUGAAACUAGAUCAAAUCUUGGCACGUUUAGGAGCCAGUGUCCCUGCCCAGGCCAUCGAUAGGUCGACUCCAUGUUGUAUAUUGGCUAGCUCUGUAGCUUGGCUCACUGGCUCUUAAACGUGGGAAGGCUUGAUCUAGUUUGAGAUUGGUGCACAAGGGCAUGUGGCAUGGAUCAAGAUCGU |