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BaseInfo

ncRNA ID novel_zma_miR3147
Species Zea mays
Class miRNA
Genome position Chr2:202742014-202742231 [-]
Reference genome RefGen_v4
Source SRR2089714;SRR2089702
Length 21
Mature sequence(if miRNA) 1 - UGUGGCAUGGAUCAAGAUCGU - 21
Stem-loop(if miRNA) --A    C   G         C   UC  C        G G            AU   GG                  UC  -U  -C   -  -CA      GGU    U
   AUCU GAU CAUGCUACA GUC  UG GUACUAAU U AAACUAGAUCAA  CUU  CACGUUUAGGAGCCAGUG  CC  GC  CAG GC   UCGAUA   CGAC C
   |||| ||| ||||||||| |||  || |||||||| | ||||||||||||  |||  ||||||||||||||||||  ||  ||  ||| ||   ||||||   |||| C
   UAGA CUA GUACGGUGU CGG  AC CGUGGUUA A UUUGAUCUAGUU  GAA  GUGCAAAUUCUCGGUCAC  GG  CG  GUC CG   GGUUAU   GUUG A
UGC    A   G         A   GA  A        G G            CG   GG                  UC  UU  AU   U  AUC      -AU    U
Stem-loop sequence AAUCUCGAUGCAUGCUACACGUCUCUGCGUACUAAUGUGAAACUAGAUCAAAUCUUGGCACGUUUAGGAGCCAGUGUCCCUGCCCAGGCCAUCGAUAGGUCGACUCCAUGUUGUAUAUUGGCUAGCUCUGUAGCUUGGCUCACUGGCUCUUAAACGUGGGAAGGCUUGAUCUAGUUUGAGAUUGGUGCACAAGGGCAUGUGGCAUGGAUCAAGAUCGU