ncRNA ID | novel_zma_miR3142 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr7:152408989-152409082 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583944;SRR2647386;SRR1583942;SRR1583943 |
Length | 24 |
Mature sequence(if miRNA) | 71 - AUUUCCGACGGCUGGCCGUGGGCC - 94 |
Stem-loop(if miRNA) |
--    GU                   - U  UU       CGGGG    G   CUCA  UGGCCAGCCGUCGGAAAUA G CU  UUUCCGA     GGCU G   ||||  ||||||||||||||||||| | ||  |||||||     ||||   GGGU  GCCGGUCGGCAGCCUUUAU C GA  AAAGGCU     CCGA G CC    --                   U U  -U       ----A    G |
Stem-loop sequence | CUCAGUUGGCCAGCCGUCGGAAAUAGUCUUUUUUCCGACGGGGGGCUGGGGAGCCAUCGGAAAUAGUCUUAUUUCCGACGGCUGGCCGUGGGCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020539916.1 |
|
0.0 | PREDICTED: Zea mays serine/arginine repetitive matrix protein 1-like (LOC109940397), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020544174.1 |
|
0.0 | PREDICTED: Zea mays uncharacterized LOC103639697 (LOC103639697), mRNA | NA | coding protein | psRNATarget |