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BaseInfo

ncRNA ID novel_zma_miR3141
Species Zea mays
Class miRNA
Genome position Chr2:235405661-235405746 [+]
Reference genome RefGen_v4
Source SRR2089714
Length 21
Mature sequence(if miRNA) 1 - AUUGGAGGGAUUUGAGGGGGC - 21
Stem-loop(if miRNA) --       -   UU             A   C        CAA
  AUUGGAG GGA  UGAGGGGGCUAUA UCU UUACUAUU   U
  ||||||| |||  ||||||||||||| ||| ||||||||
  UAGCCUC CCU  ACUCUCCCGAUAU AGG AAUGAUAA   U
CA       U   -U             C   U        AUU
Stem-loop sequence AUUGGAGGGAUUUGAGGGGGCUAUAAUCUCUUACUAUUCAAUUUUAAAUAGUAAUGGACUAUAGCCCUCUCAUUCCUCUCCGAUAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AY110812.1
ncRNA:21   CGGGGGAGUUUAGGGAGGUUA   1
  *|*|*||||||||||||||||
targets:179   UCACACUCAAAUCCCUCCAAU   199

2.0 Zea mays CL13054_1 mRNA sequence NA coding protein psRNATarget