ncRNA ID | novel_zma_miR3132 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:170016525-170016594 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089714;SRR2089715;SRR2287159;SRR2287161;SRR2287162;SRR5451005;SRR2089698;SRR2089703;SRR2089705;SRR2089706;SRR2089707 |
Length | 21 |
Mature sequence(if miRNA) | 50 - ACUUAGGAACGGAGGGAGUAC - 70 |
Stem-loop(if miRNA) |
--      UUG   C    U    A   U  AG  G   GCUCCU   CCG UCCU GGUC CUG GC  AU A   ||||||   ||| |||| |||| ||| ||  || C   UGAGGG   GGC AGGA UCAG GGU CG  UA U CA      --A   A    U    A   -  CA  A |
Stem-loop sequence | GCUCCUUUGCCGCUCCUUGGUCACUGUGCAGAUGACUAAUACGCUGGAGACUUAGGAACGGAGGGAGUAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020539258.1 |
|
1.5 | PREDICTED: Zea mays aspartyl protease family protein 1-like (LOC109940156), mRNA | NA | coding protein | psRNATarget | |||||||||
DQ246106.1 |
|
2.5 | Zea mays clone 18246 mRNA sequence | NA | coding protein | psRNATarget |