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BaseInfo

ncRNA ID osa-miR1882d
Species Oryza sativa
Class miRNA
Genome position Chr8:18739319-18739478 [-]
Reference genome MSU7
Source miRBase
Length 24
Mature sequence(if miRNA) 116 - AGAUUGCUUUCAAGGUCAUUUCUU - 139
Stem-loop(if miRNA) U     CG   C   UA           U              U     A     -C         A  U     U   A
 GUUAU  UUA CAA  UCCUAGAUUGC UUCAAGGUCAUUUC UUAGG AACCC  AUUCCCAUA AU CAGUA CCA A
 |||||  ||| |||  ||||||||||| |||||||||||||| ||||| |||||  ||||||||| || ||||| |||
 CAAUA  AGU GUU  AGGAUCUAACG AGGUUCUAGUAAAG AAUCC UUGGG  UAAGGGUAU UA GUUGU GGU G
-     AU   C   UG           C              C     C     AA         C  U     U   A
Stem-loop sequence UGUUAUCGUUACCAAUAUCCUAGAUUGCUUUCAAGGUCAUUUCUUUAGGAAACCCCAUUCCCAUAAAUUCAGUAUCCAAAGAUGGUUGUUGUAUCUAUGGGAAUAAGGGUUCCCUAACGAAAUGAUCUUGGACGCAAUCUAGGAGUUUGCUGAUAAUAAC

Reference

1 PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains";
Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C;
Genome Res. 18:1456-1465(2008).