ncRNA ID | osa-miR1882d |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr8:18739319-18739478 [-] |
Reference genome | MSU7 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 116 - AGAUUGCUUUCAAGGUCAUUUCUU - 139 |
Stem-loop(if miRNA) |
U     CG   C   UA           U              U     A     -C         A  U     U   A  GUUAU  UUA CAA  UCCUAGAUUGC UUCAAGGUCAUUUC UUAGG AACCC  AUUCCCAUA AU CAGUA CCA A  |||||  ||| |||  ||||||||||| |||||||||||||| ||||| |||||  ||||||||| || ||||| |||  CAAUA  AGU GUU  AGGAUCUAACG AGGUUCUAGUAAAG AAUCC UUGGG  UAAGGGUAU UA GUUGU GGU G -     AU   C   UG           C              C     C     AA         C  U     U   A |
Stem-loop sequence | UGUUAUCGUUACCAAUAUCCUAGAUUGCUUUCAAGGUCAUUUCUUUAGGAAACCCCAUUCCCAUAAAUUCAGUAUCCAAAGAUGGUUGUUGUAUCUAUGGGAAUAAGGGUUCCCUAACGAAAUGAUCUUGGACGCAAUCUAGGAGUUUGCUGAUAAUAAC |
1 | PMID:18687877
"A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"; Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C; Genome Res. 18:1456-1465(2008). |