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BaseInfo

ncRNA ID	ath-miRf10039-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	24
Mature sequence(if miRNA)	NA - GAUACUCGACCAGGGGGUCGAGUG - NA
Stem-loop(if miRNA)	U   G AGG         A G          GGGUGA  GAGUGAAGGUG  GAU A   UACUCGACC U UGGUCGAGUA      UC           A  ||| |   ||||||||| | ||||||||||      ||           U  CUA U   GUGAGCUGG G ACCAGCUCAU      UA           G G   G GUA         G G          ----AG  GUGCAGGUGGU
Stem-loop sequence	UGAUGAAGGUACUCGACCAUGUGGUCGAGUAGGGUGAUCGAGUGAAGGUGAUGUGGUGGACGUGAUGAUACUCGACCAGGGGGUCGAGUGAUGUGAUCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT015478.1	ncRNA:24   GUGAGCUGGGGGACCAGCUCAUAG   1   |||||||||||||||||||||||| targets:231   CACUCGACCCCCUGGUCGAGUAUC   254 Target Full Sequence	0.0	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:24   GUGAGCUGGGGGACCAGCUCAUAG   1   =||||||||||||||||||||||| targets:182   UACUCGACCCCCUGGUCGAGUAUC   205 Target Full Sequence	0.0	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:24   GUGAGCUGGGGGACCAGCUCAUAG   1   |||||||||||||||||||||||| targets:231   CACUCGACCCCCUGGUCGAGUAUC   254 Target Full Sequence	0.0	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:24   GUGAGCUGGGGGACCAGCUCAUAG   1   =||||||||||||||||||||||| targets:182   UACUCGACCCCCUGGUCGAGUAUC   205 Target Full Sequence	0.0	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT025674.1	ncRNA:24   GUGAGCUGGGGGACCAGCUCAUAG   1   =||||||||||||||||||||||| targets:309   UACUCGACCCCCUGGUCGAGUAUC   332 Target Full Sequence	0.0	Arabidopsis thaliana	NA	coding protein	psRNATarget
AY231407.1	ncRNA:24   GUGAGCUGGGGGACCAGCUCAUAG   1   =||*|||||||||||||||||||| targets:584   UACYCGACCCCCUGGUCGAGUAUC   607 Target Full Sequence	0.0	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
BT015478.1	ncRNA:24   GUGAGCUGGGGGACCAGCUCAUAG   1   =||||*|||||||||||||||||| targets:302   UACUCAACCCCCUGGUCGAGUAUC   325 Target Full Sequence	1.0	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:24   GUGAGCUGGGGGACCAGCUCAUAG   1   =||||*|||||||||||||||||| targets:302   UACUCAACCCCCUGGUCGAGUAUC   325 Target Full Sequence	1.0	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:24   GUGAGCUGGGGGACCAGCUCAUAG   1   ||||||||||||||||||||||*| targets:91   CACUCGACCCCCUGGUCGAGUAGC   114 Target Full Sequence	1.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
EF183192.1	ncRNA:24   GUGAGCUGGGGGACCAGCUCAUAG   1   ||||||||||||||||||||||** targets:125   CACUCGACCCCCUGGUCGAGUAGA   148 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:24   GUGAGCUGGGGGACCAGCUCAUAG   1   ||||||||||||||||||||||** targets:500   CACUCGACCCCCUGGUCGAGUAGA   523 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:24   GUGAGCUGGGGGACCAGCUCAUAG   1   ||||||||||||||||||||||** targets:500   CACUCGACCCCCUGGUCGAGUAGA   523 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:24   GUGAGCUGGGGGACCAGCUCAUAG   1   ||||||||||||||||||||||** targets:1572   CACUCGACCCCCUGGUCGAGUAGA   1595 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget