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BaseInfo

ncRNA ID novel_zma_miR3128
Species Zea mays
Class miRNA
Genome position Chr1:85692880-85692984 [+]
Reference genome RefGen_v4
Source SRR2089714;SRR2089701;SRR2089705
Length 24
Mature sequence(if miRNA) 1 - AAGUUGUGACGUAGUAUGUGUAGA - 24
Stem-loop(if miRNA) --             G           A    AG   C   CACAU   A  
  AAGUUGUGACGUA UAUGUGUAGAA CCUA  UGG CUA     GAA UCA
  ||||||||||||| ||||||||||| ||||  ||| |||     ||| ||U
  UUCAACACUGUGU AUACACAUCUU GGAU  GCC GAU     CUU AGA
CU             G           A    CG   A   AUAAC   G  
Stem-loop sequence AAGUUGUGACGUAGUAUGUGUAGAAACCUAAGUGGCCUACACAUGAAAUCAUAGAGUUCCAAUAUAGACCGGCUAGGAUUCUACACAUAGUGUGUCACAACUUUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ235339.1
ncRNA:24   AGAUGUGUAUGAUGCAGUGUUGAA   1
  ||||||||||*||=||||||||||
targets:155   UCUACACAUAGUAUGUCACAACUU   178

2.5 Sequence 1334 from Patent EP2985353 NA coding protein psRNATarget
JB163670.1
ncRNA:24   AGAUGUGUAUGAUGCAGUGUUGAA   1
  ||||||||||*||=||||||||||
targets:155   UCUACACAUAGUAUGUCACAACUU   178

2.5 Sequence 1334 from Patent EP2559767 NA coding protein psRNATarget
HI403209.1
ncRNA:24   AGAUGUGUAUGAUGCAGUGUUGAA   1
  ||||||||||*||=||||||||||
targets:155   UCUACACAUAGUAUGUCACAACUU   178

2.5 Sequence 1334 from Patent EP2074227 NA coding protein psRNATarget