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BaseInfo

ncRNA ID novel_zma_miR3121
Species Zea mays
Class miRNA
Genome position Chr7:130307738-130307797 [+]
Reference genome RefGen_v4
Source SRR1583944;SRR2647386;SRR2647387
Length 24
Mature sequence(if miRNA) 1 - CACUGGCACUAAAAGGAACGUGUC - 24
Stem-loop(if miRNA) --   U            A   U   -GU  
  CAC GGCACUAAAAGG ACG GUC   GCC
  ||| |||||||||||| ||| |||   ||A
  GUG CUGUGAUUUUUC UGC CGG   CGU
CC   -            G   -   GUC  
Stem-loop sequence CACUGGCACUAAAAGGAACGUGUCGUGCCAUGCCUGGGCCGUGCUUUUUAGUGUCGUGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020543355.1
ncRNA:24   CUGUGCAAGGAAAAUCACGGUCAC   1
  ||||||*||||*||||||||||||
targets:1079   GACACGGUCCUCUUAGUGCCAGUG   1102

2.5 PREDICTED: Zea mays uncharacterized LOC103637263 (LOC103637263), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020543354.1
ncRNA:24   CUGUGCAAGGAAAAUCACGGUCAC   1
  ||||||*||||*||||||||||||
targets:1164   GACACGGUCCUCUUAGUGCCAGUG   1187

2.5 PREDICTED: Zea mays uncharacterized LOC103637263 (LOC103637263), transcript variant X1, mRNA NA coding protein psRNATarget