| ncRNA ID | osa-miR5797 |
| Species | Oryza sativa |
| Class | miRNA |
| Genome position | Chr8:17084767-17084832 [+] |
| Reference genome | MSU7 |
| Source | miRBase |
| Length | 21 |
| Mature sequence(if miRNA) | 11 - UCGUGGGAUUUAUGCAGUUAA - 31 |
| Stem-loop(if miRNA) |
U C UC UAU U UG CACUG UGU GUGGGAUU GCAG UAA U ||||| ||| |||||||| |||| ||| C GUGAC AUA CAUCCUAG CGUC GUU G U - UU --U C UU |
| Stem-loop sequence | UCACUGCUGUUCGUGGGAUUUAUGCAGUUAAUGUCGUUUUGCCUGCUGAUCCUACUUAUACAGUGU |
| Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| AK103789.1 |
|
1.0 | Oryza sativa Japonica Group cDNA clone:J033145K21, full insert sequence | NA | coding protein | psRNATarget | |||||||||
| AK288866.1 |
|
1.0 | Oryza sativa Japonica Group cDNA, clone: J090078B06, full insert sequence | NA | coding protein | psRNATarget |
| 1 | PMID:22158467
"Massive analysis of rice small RNAs: mechanistic implications of regulated microRNAs and variants for differential target RNA cleavage"; Jeong DH, Park S, Zhai J, Gurazada SG, De Paoli E, Meyers BC, Green PJ; Plant Cell. 23:4185-4207(2011). |