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BaseInfo

ncRNA ID novel_zma_miR3106
Species Zea mays
Class miRNA
Genome position Chr1:186303690-186303787 [-]
Reference genome RefGen_v4
Source SRR2089714
Length 23
Mature sequence(if miRNA) 1 - ACUCGACAAAGAACCUAAGCCGG - 23
Stem-loop(if miRNA) ---UGUC          C       -CCCAA -               CC
       AGGUUCUUUG CGAGUGU      G UGGCACUCGGCAAAG  G
       |||||||||| |||||||      | |||||||||||||||  A
       UCCAAGAAAC GCUCACA      C ACCGUGAGCCGUUUC  C
GGCCGAA          A       AUACAG G               UC
Stem-loop sequence UGUCAGGUUCUUUGCCGAGUGUCCCAAGUGGCACUCGGCAAAGCCGACCUCUUUGCCGAGUGCCAGCGACAUAACACUCGACAAAGAACCUAAGCCGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB169026.1
ncRNA:19   GAAUCCAAGAAACAGCUCA   1
  |||||||||||||*|||||
targets:1   CUUAGGUUCUUUGCCGAGU   19

1.5 Sequence 6690 from Patent EP2559767 NA coding protein psRNATarget
HI408565.1
ncRNA:19   GAAUCCAAGAAACAGCUCA   1
  |||||||||||||*|||||
targets:1   CUUAGGUUCUUUGCCGAGU   19

1.5 Sequence 6690 from Patent EP2074227 NA coding protein psRNATarget
LQ240695.1
ncRNA:19   GAAUCCAAGAAACAGCUCA   1
  |||||||||||||*|||||
targets:1   CUUAGGUUCUUUGCCGAGU   19

1.5 Sequence 6690 from Patent EP2985353 NA coding protein psRNATarget