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BaseInfo

ncRNA ID	novel_zma_miR3105
Species	Zea mays
Class	miRNA
Genome position	Chr7:106976819-106976947 [+]
Reference genome	RefGen_v4
Source	SRR1583944
Length	24
Mature sequence(if miRNA)	1 - AAUGUUAUGUCCGACGGCUUAGUG - 24
Stem-loop(if miRNA)	--AA               C   GUGU G              G     UG          C  CU     UGUUAUGUCCGACGG UUA    A GCCGUCGGACAUAA GUGUA  UUAUGUCCGA GG  U     ||||||||||||||| |||    | |||||||||||||| |||||  |||||||||| ||  A     ACAAUACAGGCUGCC AAU    U CGGCAGCCUGUAUU UAUAU  AAUACAGGCU CC  A GACG               A   ---- G              G     UG          A  AA
Stem-loop sequence	AAUGUUAUGUCCGACGGCUUAGUGUAGGCCGUCGGACAUAAGGUGUAUGUUAUGUCCGACGGCUUAAAACCAUCGGACAUAAGUUAUAUGUUAUGUCCGACGGCGUUAAACCGUCGGACAUAACAGCAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020548957.1	ncRNA:24   GUGAUUCGGCAGCCUGUAUUGUAA   1   *=**==|||||||||||||||=|| targets:10   AGAAGGGCCGUCGGACAUAACGUU   33 Target Full Sequence	2.5	PREDICTED: Zea mays platelet glycoprotein Ib alpha chain-like (LOC109944257), mRNA	NA	coding protein	psRNATarget
XM_020548257.1	ncRNA:24   GUGAUUCGGCAGCCUGUAUUGUAA   1   |=***|||||||||||||||||** targets:2667   CGGGCAGCCGUCGGACAUAACACA   2690 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103648558 (LOC103648558), transcript variant X8, mRNA	NA	coding protein	psRNATarget
XM_020548255.1	ncRNA:24   GUGAUUCGGCAGCCUGUAUUGUAA   1   |=***|||||||||||||||||** targets:2680   CGGGCAGCCGUCGGACAUAACACA   2703 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103648558 (LOC103648558), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_020548256.1	ncRNA:24   GUGAUUCGGCAGCCUGUAUUGUAA   1   |=***|||||||||||||||||** targets:2699   CGGGCAGCCGUCGGACAUAACACA   2722 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103648558 (LOC103648558), transcript variant X7, mRNA	NA	coding protein	psRNATarget
XM_008673007.2	ncRNA:24   GUGAUUCGGCAGCCUGUAUUGUAA   1   |=***|||||||||||||||||** targets:2826   CGGGCAGCCGUCGGACAUAACACA   2849 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103648558 (LOC103648558), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020548252.1	ncRNA:24   GUGAUUCGGCAGCCUGUAUUGUAA   1   |=***|||||||||||||||||** targets:2831   CGGGCAGCCGUCGGACAUAACACA   2854 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103648558 (LOC103648558), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020548251.1	ncRNA:24   GUGAUUCGGCAGCCUGUAUUGUAA   1   |=***|||||||||||||||||** targets:2840   CGGGCAGCCGUCGGACAUAACACA   2863 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103648558 (LOC103648558), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020548259.1	ncRNA:24   GUGAUUCGGCAGCCUGUAUUGUAA   1   |=***|||||||||||||||||** targets:2875   CGGGCAGCCGUCGGACAUAACACA   2898 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103648558 (LOC103648558), transcript variant X10, mRNA	NA	coding protein	psRNATarget
XM_020548258.1	ncRNA:24   GUGAUUCGGCAGCCUGUAUUGUAA   1   |=***|||||||||||||||||** targets:2909   CGGGCAGCCGUCGGACAUAACACA   2932 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103648558 (LOC103648558), transcript variant X9, mRNA	NA	coding protein	psRNATarget
XM_020548254.1	ncRNA:24   GUGAUUCGGCAGCCUGUAUUGUAA   1   |=***|||||||||||||||||** targets:2920   CGGGCAGCCGUCGGACAUAACACA   2943 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103648558 (LOC103648558), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_020548253.1	ncRNA:24   GUGAUUCGGCAGCCUGUAUUGUAA   1   |=***|||||||||||||||||** targets:2934   CGGGCAGCCGUCGGACAUAACACA   2957 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103648558 (LOC103648558), transcript variant X4, mRNA	NA	coding protein	psRNATarget