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BaseInfo

ncRNA ID	novel_zma_miR3103
Species	Zea mays
Class	miRNA
Genome position	Chr7:98526842-98526963 [+]
Reference genome	RefGen_v4
Source	SRR1583944
Length	24
Mature sequence(if miRNA)	1 - ACCUCUUAUAUAUAUAUAUAUAUA - 24
Stem-loop(if miRNA)	----A   CU                                                   A      CCU  UAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAU U      |||  |||||||||||||||||||||||||||||||||||||||||||||||||||      GGG  AUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUA A AAGAA   AU                                                   U
Stem-loop sequence	ACCUCUUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAGGGAAGAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU953241.1	ncRNA:24   AUAUAUAUAUAUAUAUAUUCUCCA   1   ||||||||||||||||||||||*| targets:390   UAUAUAUAUAUAUAUAUAAGAGCU   413 Target Full Sequence	1.5	Zea mays clone 1392998 mRNA sequence	NA	coding protein	psRNATarget
EU963055.1	ncRNA:24   AUAUAUAUAUAUAUAUAUUCUCCA   1   |||||||||||||||||||*|||* targets:714   UAUAUAUAUAUAUAUAUAAAAGGA   737 Target Full Sequence	2.5	Zea mays clone 256949 60S ribosomal protein L12 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001138979.1	ncRNA:24   AUAUAUAUAUAUAUAUAUUCUCCA   1   |=|=|||||||||||||||*|||| targets:1815   UGUGUAUAUAUAUAUAUAACAGGU   1838 Target Full Sequence	1.5	Zea mays putative protein kinase superfamily protein (LOC100193907), mRNA	NA	coding protein	psRNATarget
BT036291.1	ncRNA:24   AUAUAUAUAUAUAUAUAUUCUCCA   1   |=|=|||||||||||||||*|||| targets:1815   UGUGUAUAUAUAUAUAUAACAGGU   1838 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0105F05 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008668471.2	ncRNA:24   AUAUAUAUAUAUAUAUAUUCUCCA   1   ||*=||||||||||||||*||||* targets:1694   UACGUAUAUAUAUAUAUAUGAGGA   1717 Target Full Sequence	2.5	PREDICTED: Zea mays probable cystathionine gamma-synthase 2 (LOC103645417), mRNA	NA	coding protein	psRNATarget