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BaseInfo

ncRNA ID	novel_zma_miR3098
Species	Zea mays
Class	miRNA
Genome position	Chr10:141665980-141666046 [-]
Reference genome	RefGen_v4
Source	SRR2089714
Length	24
Mature sequence(if miRNA)	44 - GUAUAGAGAGUCGUGUAGAGACGG - 67
Stem-loop(if miRNA)	GUAUA     UC     -        CUCUUCA      GAGAG  GUGUA GAGACGGG       C      |||||  ||||| ||||||||       A      CUUUU  CAUAU CUCUGCCC       G -UUCA     UU     U        CAAAAAA
Stem-loop sequence	GUAUAGAGAGUCGUGUAGAGACGGGCUCUUCACAGAAAAAACCCCGUCUCUUAUACUUUUUUCACUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008663725.2	ncRNA:24   GGCAGAGAUGUGCUGAGAGAUAUG   1   |||||||||||||||||||||||| targets:1679   CCGUCUCUACACGACUCUCUAUAC   1702 Target Full Sequence	0.0	PREDICTED: Zea mays scramblase family protein (LOC100282688), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU947946.1	ncRNA:24   GGCAGAGAUGUGCUGAGAGAUAUG   1   ==|||||||||||||||||||||= targets:390   UUGUCUCUACACGACUCUCUAUAU   413 Target Full Sequence	1.0	Zea mays clone 367090 mRNA sequence	NA	coding protein	psRNATarget
XM_020541351.1	ncRNA:24   GGCAGAGAUGUGCUGAGAGAUAUG   1   |=||||||*|||||||=||||||| targets:1776   CUGUCUCUUCACGACUUUCUAUAC   1799 Target Full Sequence	2.5	PREDICTED: Zea mays protein MARD1 (LOC103631998), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008653856.2	ncRNA:24   GGCAGAGAUGUGCUGAGAGAUAUG   1   |=||||||*|||||||=||||||| targets:1797   CUGUCUCUUCACGACUUUCUAUAC   1820 Target Full Sequence	2.5	PREDICTED: Zea mays protein MARD1 (LOC103631998), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020541350.1	ncRNA:24   GGCAGAGAUGUGCUGAGAGAUAUG   1   |=||||||*|||||||=||||||| targets:1880   CUGUCUCUUCACGACUUUCUAUAC   1903 Target Full Sequence	2.5	PREDICTED: Zea mays protein MARD1 (LOC103631998), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU942503.1	ncRNA:24   GGCAGAGAUGUGCUGAGAGAUAUG   1   ==||=||*|||||||||||||||= targets:432   UUGUUUCCACACGACUCUCUAUAU   455 Target Full Sequence	2.0	Zea mays clone 1511533 mRNA sequence	NA	coding protein	psRNATarget