ncRNA ID | novel_zma_miR3093 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr7:82963230-82963329 [+] |
Reference genome | RefGen_v4 |
Source | SRR1583944 |
Length | 24 |
Mature sequence(if miRNA) | 77 - ACCGUCUGUGAUGUUGUCUAUCAC - 100 |
Stem-loop(if miRNA) |
--                       GUUAAUUC     A       UAAA   GAUAGACAACAUCACAGGCGGUU        CGACC CCUGUGA    U   |||||||||||||||||||||||        ||||| |||||||   CUAUCUGUUGUAGUGUCUGCCAA        GCUGG GGACACU    U CA                       AAACAACA     C       UCAA |
Stem-loop sequence | GAUAGACAACAUCACAGGCGGUUGUUAAUUCCGACCACCUGUGAUAAAUUAACUUCACAGGCGGUCGACAACAAAAACCGUCUGUGAUGUUGUCUAUCAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020538460.1 |
|
2.5 | PREDICTED: Zea mays hydroxyproline O-galactosyltransferase GALT6-like (LOC109939944), mRNA | NA | coding protein | psRNATarget | |||||||||
XM_008667070.2 |
|
2.5 | PREDICTED: Zea mays hydroxyproline O-galactosyltransferase GALT6 (LOC103643899), mRNA | NA | coding protein | psRNATarget |