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BaseInfo

ncRNA ID osa-miR2874
Species Oryza sativa
Class miRNA
Genome position Chr8:15598028-15598128 [+]
Reference genome MSU7
Source miRBase
Length 24
Mature sequence(if miRNA) 69 - AUGUGAACAGUGUCAAACAGUGUC - 92
Stem-loop(if miRNA)        GUUU          GA                    C     U
ACACUAU    GCACUGUUUG  ACUGUUCACAUGUUGGUUCC GGCAG A
|||||||    ||||||||||  |||||||||||||||||||| ||||| A
UGUGAUA    UGUGACAAAC  UGACAAGUGUACAAUCAAGG UCGUC A
       -AAC          UG                    -     A
Stem-loop sequence ACACUAUGUUUGCACUGUUUGGAACUGUUCACAUGUUGGUUCCCGGCAGUAAAACUGCUGGAACUAACAUGUGAACAGUGUCAAACAGUGUCAAAUAGUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK070057.1
ncRNA:24   CUGUGACAAACUGUGACAAGUGUA   1
  **|||||||**||||||||||||*
targets:1795   AUCACUGUUGCACACUGUUCACAA   1818

3.0 Oryza sativa Japonica Group cDNA clone:J023041K22, full insert sequence NA coding protein psRNATarget

Reference

1 PMID:19903869
"Rice MicroRNA effector complexes and targets";
Wu L, Zhang Q, Zhou H, Ni F, Wu X, Qi Y;
Plant Cell. 21:3421-3435(2009).