ncRNA ID | osa-miR2874 |
Species | Oryza sativa |
Class | miRNA |
Genome position | Chr8:15598028-15598128 [+] |
Reference genome | MSU7 |
Source | miRBase |
Length | 24 |
Mature sequence(if miRNA) | 69 - AUGUGAACAGUGUCAAACAGUGUC - 92 |
Stem-loop(if miRNA) |
       GUUU          GA                    C     U ACACUAU    GCACUGUUUG  ACUGUUCACAUGUUGGUUCC GGCAG A |||||||    ||||||||||  |||||||||||||||||||| ||||| A UGUGAUA    UGUGACAAAC  UGACAAGUGUACAAUCAAGG UCGUC A        -AAC          UG                    -     A |
Stem-loop sequence | ACACUAUGUUUGCACUGUUUGGAACUGUUCACAUGUUGGUUCCCGGCAGUAAAACUGCUGGAACUAACAUGUGAACAGUGUCAAACAGUGUCAAAUAGUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK070057.1 |
|
3.0 | Oryza sativa Japonica Group cDNA clone:J023041K22, full insert sequence | NA | coding protein | psRNATarget |
1 | PMID:19903869
"Rice MicroRNA effector complexes and targets"; Wu L, Zhang Q, Zhou H, Ni F, Wu X, Qi Y; Plant Cell. 21:3421-3435(2009). |