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BaseInfo

ncRNA ID novel_zma_miR3085
Species Zea mays
Class miRNA
Genome position Chr1:244006875-244006956 [+]
Reference genome RefGen_v4
Source SRR2089714
Length 24
Mature sequence(if miRNA) 59 - CACCUGGGACACUCGGCAAAGACG - 82
Stem-loop(if miRNA) --             C G     CA               UA
  UCUUUGCCGAGUG U UCAGG  GACACUCGGCAAAGG  A
  ||||||||||||| | |||||  |||||||||||||||
  AGAAACGGCUCAC A GGUCC  CUGUGAGCCGUUUCC  A
GC             - G     -A               UC
Stem-loop sequence UCUUUGCCGAGUGCUGUCAGGCAGACACUCGGCAAAGGUAAACUCCUUUGCCGAGUGUCACCUGGGACACUCGGCAAAGACG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU952231.1
ncRNA:24   GCAGAAACGGCUCACAGGGUCCAC   1
  ***|||||||||||||||*||||*
targets:1445   AUACUUUGCCGAGUGUCCAAGGUA   1468

2.5 Zea mays clone 1234152 mRNA sequence NA coding protein psRNATarget