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BaseInfo

ncRNA ID	novel_zma_miR3077
Species	Zea mays
Class	miRNA
Genome position	Chr9:4459537-4459609 [+]
Reference genome	RefGen_v4
Source	SRR2089714
Length	24
Mature sequence(if miRNA)	50 - CAAGGGCGGACUGUCCGCGGCCUU - 73
Stem-loop(if miRNA)	-     --           GG   G    -   -    G  GGGCC  GGACGGUCCGC  CCU GUGC GAG GCGC G  |||||  |||||||||||  ||| |||| ||| ||||  UCCGG  CCUGUCAGGCG  GGA CGCG CUC CGUG U U     CG           --   A    U   U    G
Stem-loop sequence	GGGCCGGACGGUCCGCGGCCUGGUGCGAGGCGCGGUGGUGCUCUCUGCGCAAGGGCGGACUGUCCGCGGCCUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT088349.1	ncRNA:24   UUCCGGCGCCUGUCAGGCGGGAAC   1   *||||||||||||||||||||*|| targets:1266   CAGGCCGCGGACAGUCCGCCCCUG   1289 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFc0151F11 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001196968.1	ncRNA:24   UUCCGGCGCCUGUCAGGCGGGAAC   1   *||||||||||||||||||||*|| targets:1266   CAGGCCGCGGACAGUCCGCCCCUG   1289 Target Full Sequence	1.5	Zea mays uncharacterized LOC100502490 (LOC100502490), mRNA	NA	coding protein	psRNATarget
XM_020539115.1	ncRNA:24   UUCCGGCGCCUGUCAGGCGGGAAC   1   *||||||||||||||||||||*|| targets:2709   CAGGCCGCGGACAGUCCGCCCCUG   2732 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC100384241 (gpm299b), transcript variant X7, mRNA	NA	coding protein	psRNATarget