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BaseInfo

ncRNA ID novel_zma_miR3072
Species Zea mays
Class miRNA
Genome position Chr9:29045044-29045124 [-]
Reference genome RefGen_v4
Source SRR2089714;SRR2287165;SRR2089699;SRR2089700;SRR2089701;SRR2089704;SRR2089708
Length 24
Mature sequence(if miRNA) 1 - AGACGUUGGCUCUCGGCAAAGACU - 24
Stem-loop(if miRNA) --G          U    G    G                A
   CUUUGCCGAG GCUA AUGU UGGCACUCGGCAAAGA G
   |||||||||| |||| |||| ||||||||||||||||
   GAAACGGCUC CGGU UGCA ACCGUGAGCCGUUUCU C
UCA          U    -    G                C
Stem-loop sequence GCUUUGCCGAGUGCUAGAUGUGUGGCACUCGGCAAAGAAGCCUCUUUGCCGAGUGCCAGACGUUGGCUCUCGGCAAAGACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT063684.1
ncRNA:24   UCAGAAACGGCUCUCGGUUGCAGA   1
  |||||||||||||||||||||*||
targets:1249   AGUCUUUGCCGAGAGCCAACGACU   1272

1.5 Zea mays full-length cDNA clone ZM_BFc0094N19 mRNA, complete cds NA coding protein psRNATarget
NM_001175015.1
ncRNA:24   UCAGAAACGGCUCUCGGUUGCAGA   1
  |||||||||||||||||||||*||
targets:1249   AGUCUUUGCCGAGAGCCAACGACU   1272

1.5 Zea mays uncharacterized LOC100382263 (LOC100382263), mRNA NA coding protein psRNATarget