Search result

BaseInfo

ncRNA ID	novel_zma_miR3064
Species	Zea mays
Class	miRNA
Genome position	Chr9:130242864-130242925 [+]
Reference genome	RefGen_v4
Source	SRR2089714
Length	24
Mature sequence(if miRNA)	1 - CGGACAUAAGCUUAUCUCCGACGG - 24
Stem-loop(if miRNA)	--               CUC       CC U   CGGACAUAAGCUUAU   CGACGGC  G C   |||||||||||||||   |||||||  | U   GUCUGUAUUCGAAUA   GCUGCCG  C A CA               CAU       -A A
Stem-loop sequence	CGGACAUAAGCUUAUCUCCGACGGCCCGUCUAACAGCCGUCGUACAUAAGCUUAUGUCUGAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI405856.1	ncRNA:24   GGCAGCCUCUAUUCGAAUACAGGC   1   ||||||||||||||*||||||||| targets:4   CCGUCGGAGAUAAGGUUAUGUCCG   27 Target Full Sequence	1.5	Sequence 3981 from Patent EP2074227	NA	coding protein	psRNATarget
JB166317.1	ncRNA:24   GGCAGCCUCUAUUCGAAUACAGGC   1   ||||||||||||||*||||||||| targets:4   CCGUCGGAGAUAAGGUUAUGUCCG   27 Target Full Sequence	1.5	Sequence 3981 from Patent EP2559767	NA	coding protein	psRNATarget
LQ237986.1	ncRNA:24   GGCAGCCUCUAUUCGAAUACAGGC   1   ||||||||||||||*||||||||| targets:4   CCGUCGGAGAUAAGGUUAUGUCCG   27 Target Full Sequence	1.5	Sequence 3981 from Patent EP2985353	NA	coding protein	psRNATarget
LQ239089.1	ncRNA:24   GGCAGCCUCUAUUCGAAUACAGGC   1   *|||||||*||||||||||||||* targets:3   ACGUCGGACAUAAGCUUAUGUCCA   26 Target Full Sequence	2.0	Sequence 5084 from Patent EP2985353	NA	coding protein	psRNATarget
HI406959.1	ncRNA:24   GGCAGCCUCUAUUCGAAUACAGGC   1   *|||||||*||||||||||||||* targets:3   ACGUCGGACAUAAGCUUAUGUCCA   26 Target Full Sequence	2.0	Sequence 5084 from Patent EP2074227	NA	coding protein	psRNATarget
JB167420.1	ncRNA:24   GGCAGCCUCUAUUCGAAUACAGGC   1   *|||||||*||||||||||||||* targets:3   ACGUCGGACAUAAGCUUAUGUCCA   26 Target Full Sequence	2.0	Sequence 5084 from Patent EP2559767	NA	coding protein	psRNATarget