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BaseInfo

ncRNA ID	novel_zma_miR3051
Species	Zea mays
Class	miRNA
Genome position	Chr10:81010764-81010901 [+]
Reference genome	RefGen_v4
Source	SRR1583944;SRR2647388;SRR1583942;SRR1583941
Length	21
Mature sequence(if miRNA)	1 - UCCGUUUCAAAUUAUAAGUUG - 21
Stem-loop(if miRNA)	--       C           UG                 UCA    UUU  C     -AUUUA    U   UCCGUUU AAAUUAUAAGU  UUCUAGCUUUUCUAGGU   UAGU   GG UAUGU      CAUA A   ||||||| |||||||||||  |||||||||||||||||   ||||   || |||||      |||| C   AGGUAAA UUUGAUAUUCA  AAGAUCGAAAAGAUCUA   AUCA   UC AUACA      GUAU A GG       A           GU                 UAC    UUU  A     GGUUCC    C
Stem-loop sequence	UCCGUUUCAAAUUAUAAGUUGUUCUAGCUUUUCUAGGUUCAUAGUUUUGGCUAUGUAUUUACAUAUACACUAUGCCUUGGACAUAACUUUUACUACAUAUCUAGAAAAGCUAGAAUGACUUAUAGUUUAAAAUGGAGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AY112431.1	ncRNA:21   GUUGAAUAUUAAACUUUGCCU   1   *=||||||||||||||||||| targets:60   GGACUUAUAAUUUGAAACGGA   80 Target Full Sequence	0.0	Zea mays CL7452_1 mRNA sequence	NA	coding protein	psRNATarget
EZ052604.1	ncRNA:21   GUUGAAUAUUAAACUUUGCCU   1   *=||||||||||||||||||| targets:14   GGACUUAUAAUUUGAAACGGA   34 Target Full Sequence	0.0	TSA: Zea mays contig53725, mRNA sequence	NA	coding protein	psRNATarget
EU945766.1	ncRNA:21   GUUGAAUAUUAAACUUUGCCU   1   ||||*||*||||||||||||| targets:811   CAACAUACAAUUUGAAACGGA   831 Target Full Sequence	2.0	Zea mays clone 285090 mRNA sequence	NA	coding protein	psRNATarget
BT084539.2	ncRNA:21   GUUGAAUAUUAAACUUUGCCU   1   |||*||||||||||||||*|| targets:18   CAAAUUAUAAUUUGAAACCGA   38 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0129B11 mRNA, complete cds	NA	coding protein	psRNATarget
BT069072.2	ncRNA:21   GUUGAAUAUUAAACUUUGCCU   1   |||*||||||||||||||*|| targets:11   CAAAUUAUAAUUUGAAACCGA   31 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0163J06 mRNA, complete cds	NA	coding protein	psRNATarget