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BaseInfo

ncRNA ID	novel_zma_miR3050
Species	Zea mays
Class	miRNA
Genome position	Chr8:157426524-157426629 [-]
Reference genome	RefGen_v4
Source	SRR2089714
Length	24
Mature sequence(if miRNA)	1 - CUCGGACAAGAAAUUAGGCACGGU - 24
Stem-loop(if miRNA)	--   U      -G  CG        UC  UA  G CCA    UAUG      CG   CGU GUUUAG  UC  GUCCGAGC  GG  CG U   GUUC    CGGGCC  G   ||| ||||||  ||  ||||||||  ||  || |   ||||    ||||||   GCA CGGAUU  AG  CAGGCUCG  CC  GC A   UAAG    GCCCGG  G UG   -      AA  AA        GA  GG  G --A    CACA      UU
Stem-loop sequence	CGUUGUUUAGGUCCGGUCCGAGCUCGGUACGGUCCAGUUCUAUGCGGGCCCGGGUUGGCCCGACACGAAUAAGCGGGCCAGGCUCGGACAAGAAAUUAGGCACGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ072191.1	ncRNA:24   UGGCACGGAUUAAAGAACAGGCUC   1   |||||||||||||||*|||||||| targets:49   ACCGUGCCUAAUUUCCUGUCCGAG   72 Target Full Sequence	1.5	TSA: Zea mays contig07828, mRNA sequence	NA	coding protein	psRNATarget
XM_008660413.2	ncRNA:24   UGGCACGGAUUAAAGAACAGGCUC   1   ||||||||||=||||||||||||* targets:886   ACCGUGCCUAGUUUCUUGUCCGAA   909 Target Full Sequence	2.0	PREDICTED: Zea mays phosphomevalonate kinase (LOC100282968), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008660412.2	ncRNA:24   UGGCACGGAUUAAAGAACAGGCUC   1   ||||||||||=||||||||||||* targets:882   ACCGUGCCUAGUUUCUUGUCCGAA   905 Target Full Sequence	2.0	PREDICTED: Zea mays phosphomevalonate kinase (LOC100282968), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008660414.2	ncRNA:24   UGGCACGGAUUAAAGAACAGGCUC   1   ||||||||||=||||||||||||* targets:888   ACCGUGCCUAGUUUCUUGUCCGAA   911 Target Full Sequence	2.0	PREDICTED: Zea mays phosphomevalonate kinase (LOC100282968), transcript variant X3, mRNA	NA	coding protein	psRNATarget
EZ105062.1	ncRNA:24   UG-GCACGGAUUAAAGAACAGGCUC   1   ||-||*||=*||||||||||||||| targets:84   ACGCGGGCUCAAUUUCUUGUCCGAG   108 Target Full Sequence	2.0	TSA: Zea mays contig40719, mRNA sequence	NA	coding protein	psRNATarget