ncRNA ID | novel_zma_miR3049 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr6:15448834-15448968 [-] |
Reference genome | RefGen_v4 |
Source | SRR1583944 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGCCGACGGGAGUUAUCUAAUUCC - 24 |
Stem-loop(if miRNA) |
--     AC               GGC      G  G   A AG   AAA   AG          G C   AGUUA  UAAUUCCCGUCGGCU   GGCUGG CC ACG G  UUA   UAA  CCCGUCGGCU G G   |||||  |||||||||||||||   |||||| || ||| |  |||   |||  |||||||||| |   UUAAU  AUUGAGGGCAGCCGA   UCGAUC GG UGC C  AAU   AUU  GGGUAGCCGG U G CC     CU               AUU      -  G   C GA   AAA   GA          G C |
Stem-loop sequence | AGUUAACUAAUUCCCGUCGGCUGGCGGCUGGGCCGACGAGAGUUAAAAUAAAGCCCGUCGGCUGGCGGCUGGGCCGAUGGGAGUUAAAAUAAAGCCCGUGGGCUAGCUUUAAGCCGACGGGAGUUAUCUAAUUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008682205.1 |
|
3.0 | PREDICTED: Zea mays proline-rich receptor-like protein kinase PERK2 (LOC103655449), mRNA | NA | coding protein | psRNATarget |