ncRNA ID | novel_zma_miR3044 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr8:147724535-147724670 [+] |
Reference genome | RefGen_v4 |
Source | SRR2089714;SRR2287031;SRR2287159 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UAUGGUGGAAGGAUAUGAGGGUAA - 24 |
Stem-loop(if miRNA) |
--           GA  U                    AG                         CCC   UAUGGUGGAAG  UA GAGGGUAAAAUAUCACUUUG  AUUACAAAUAAGCUGAAAUAAGCUA   A   |||||||||||  || ||||||||||||||||||||  |||||||||||||||||||||||||   AUACCACCUUC  AU CUCCCAUUUUAUAGUGAAAC  UGAUGUUUAUUCGACUUUAUUCGAU   A UA           UC  C                    CU                         CAU |
Stem-loop sequence | UAUGGUGGAAGGAUAUGAGGGUAAAAUAUCACUUUGAGAUUACAAAUAAGCUGAAAUAAGCUACCCAAUACUAGCUUAUUUCAGCUUAUUUGUAGUUCCAAAGUGAUAUUUUACCCUCCUACUCUUCCACCAUAAU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
BT087535.1 |
|
2.0 | Zea mays full-length cDNA clone ZM_BFb0104B17 mRNA, complete cds | NA | coding protein | psRNATarget |