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BaseInfo

ncRNA ID novel_zma_miR3039
Species Zea mays
Class miRNA
Genome position Chr7:5734839-5734921 [+]
Reference genome RefGen_v4
Source SRR2089714;SRR2287161;SRR5451006;SRR1997866
Length 24
Mature sequence(if miRNA) 1 - GUGGAUUGAGUGAGAUUGGAUGGA - 24
Stem-loop(if miRNA) --        AG          -----U   - UUAAAUCCCAA
  GUGGAUUG  UGAGAUUGGA      GGA U           G
  ||||||||  ||||||||||      ||| |           U
  UACCUAAC  ACUCUAACCU      UUC U           A
GU        CU          UUUUAA   U UCUUAAACUGA
Stem-loop sequence GUGGAUUGAGUGAGAUUGGAUGGAUUUAAAUCCCAAGUAAGUCAAAUUCUUUCUUAAUUUUUCCAAUCUCAUCCAAUCCAUUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB166354.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *|||||||||||||||||||||||
targets:77   CCCAUCCAAUCUCACUCAAUCCAC   100

0.0 Sequence 4018 from Patent EP2559767 NA coding protein psRNATarget
LQ238023.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *|||||||||||||||||||||||
targets:77   CCCAUCCAAUCUCACUCAAUCCAC   100

0.0 Sequence 4018 from Patent EP2985353 NA coding protein psRNATarget
HI405893.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *|||||||||||||||||||||||
targets:77   CCCAUCCAAUCUCACUCAAUCCAC   100

0.0 Sequence 4018 from Patent EP2074227 NA coding protein psRNATarget
BT086633.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *|||||||||||||||||||||||
targets:453   CCCAUCCAAUCUCACUCAAUCCAC   476

0.0 Zea mays full-length cDNA clone ZM_BFa0068P14 mRNA, complete cds NA coding protein psRNATarget
BT063416.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *|||||||||||||||||||||||
targets:2078   CCCAUCCAAUCUCACUCAAUCCAC   2101

0.0 Zea mays full-length cDNA clone ZM_BFc0061L20 mRNA, complete cds NA coding protein psRNATarget
NM_001154362.2
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *|||||||||||||||||||||||
targets:2150   CCCAUCCAAUCUCACUCAAUCCAC   2173

0.0 Zea mays protein kinase domain containing protein (LOC100281444), mRNA NA coding protein psRNATarget
EU956718.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *|||||||||||||||||||||||
targets:2151   CCCAUCCAAUCUCACUCAAUCCAC   2174

0.0 Zea mays clone 1571610 protein kinase domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008674604.2
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *|||||||||||||||||||||||
targets:2279   CCCAUCCAAUCUCACUCAAUCCAC   2302

0.0 PREDICTED: Zea mays protein kinase domain containing protein (LOC100281444), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020549704.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *|||||||||||||||||||||||
targets:2286   CCCAUCCAAUCUCACUCAAUCCAC   2309

0.0 PREDICTED: Zea mays protein kinase domain containing protein (LOC100281444), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020549703.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *|||||||||||||||||||||||
targets:2346   CCCAUCCAAUCUCACUCAAUCCAC   2369

0.0 PREDICTED: Zea mays protein kinase domain containing protein (LOC100281444), transcript variant X1, mRNA NA coding protein psRNATarget
EZ092645.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *=||||||||||||||||||||||
targets:14   CUCAUCCAAUCUCACUCAAUCCAC   37

0.0 TSA: Zea mays contig28294, mRNA sequence NA coding protein psRNATarget
JB166338.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *=||||||||||||||||||||||
targets:85   CUCAUCCAAUCUCACUCAAUCCAC   108

0.0 Sequence 4002 from Patent EP2559767 NA coding protein psRNATarget
HI405877.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *=||||||||||||||||||||||
targets:85   CUCAUCCAAUCUCACUCAAUCCAC   108

0.0 Sequence 4002 from Patent EP2074227 NA coding protein psRNATarget
LQ238007.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *=||||||||||||||||||||||
targets:85   CUCAUCCAAUCUCACUCAAUCCAC   108

0.0 Sequence 4002 from Patent EP2985353 NA coding protein psRNATarget
BT062183.2
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *=||||||||||||||||||||||
targets:244   CUCAUCCAAUCUCACUCAAUCCAC   267

0.0 Zea mays full-length cDNA clone ZM_BFb0224O15 mRNA, complete cds NA coding protein psRNATarget
HI403043.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *=||||||||||||=|||||||||
targets:96   CUCAUCCAAUCUCAUUCAAUCCAC   119

1.5 Sequence 1168 from Patent EP2074227 NA coding protein psRNATarget
JB163504.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *=||||||||||||=|||||||||
targets:96   CUCAUCCAAUCUCAUUCAAUCCAC   119

1.5 Sequence 1168 from Patent EP2559767 NA coding protein psRNATarget
LQ235173.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *=||||||||||||=|||||||||
targets:96   CUCAUCCAAUCUCAUUCAAUCCAC   119

1.5 Sequence 1168 from Patent EP2985353 NA coding protein psRNATarget
XM_008674377.2
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *=||||=|||||||||||||||||
targets:3392   CUCAUCUAAUCUCACUCAAUCCAC   3415

1.0 PREDICTED: Zea mays uncharacterized LOC100276614 (LOC100276614), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008674376.2
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *=||||=|||||||||||||||||
targets:3405   CUCAUCUAAUCUCACUCAAUCCAC   3428

1.0 PREDICTED: Zea mays uncharacterized LOC100276614 (LOC100276614), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008674375.2
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *=||||=|||||||||||||||||
targets:3436   CUCAUCUAAUCUCACUCAAUCCAC   3459

1.0 PREDICTED: Zea mays uncharacterized LOC100276614 (LOC100276614), transcript variant X1, mRNA NA coding protein psRNATarget
JB166339.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  **=|||||||||||||||||||||
targets:89   CAUAUCCAAUCUCACUCAAUCCAC   112

0.0 Sequence 4003 from Patent EP2559767 NA coding protein psRNATarget
HI405878.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  **=|||||||||||||||||||||
targets:89   CAUAUCCAAUCUCACUCAAUCCAC   112

0.0 Sequence 4003 from Patent EP2074227 NA coding protein psRNATarget
LQ238008.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  **=|||||||||||||||||||||
targets:89   CAUAUCCAAUCUCACUCAAUCCAC   112

0.0 Sequence 4003 from Patent EP2985353 NA coding protein psRNATarget
HI405889.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||*||||||||||||
targets:77   CCCAUCCAAUCCCACUCAAUCCAC   100

1.5 Sequence 4014 from Patent EP2074227 NA coding protein psRNATarget
JB166350.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||*||||||||||||
targets:77   CCCAUCCAAUCCCACUCAAUCCAC   100

1.5 Sequence 4014 from Patent EP2559767 NA coding protein psRNATarget
LQ238019.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||*||||||||||||
targets:77   CCCAUCCAAUCCCACUCAAUCCAC   100

1.5 Sequence 4014 from Patent EP2985353 NA coding protein psRNATarget
LQ237971.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||*||||||||||||
targets:87   CCCAUCCAAUCCCACUCAAUCCAC   110

1.5 Sequence 3966 from Patent EP2985353 NA coding protein psRNATarget
HI405841.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||*||||||||||||
targets:87   CCCAUCCAAUCCCACUCAAUCCAC   110

1.5 Sequence 3966 from Patent EP2074227 NA coding protein psRNATarget
JB166302.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||*||||||||||||
targets:87   CCCAUCCAAUCCCACUCAAUCCAC   110

1.5 Sequence 3966 from Patent EP2559767 NA coding protein psRNATarget
JB163555.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||*||||||||||||
targets:96   CCCAUCCAAUCCCACUCAAUCCAC   119

1.5 Sequence 1219 from Patent EP2559767 NA coding protein psRNATarget
HI403094.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||*||||||||||||
targets:96   CCCAUCCAAUCCCACUCAAUCCAC   119

1.5 Sequence 1219 from Patent EP2074227 NA coding protein psRNATarget
LQ235224.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||*||||||||||||
targets:96   CCCAUCCAAUCCCACUCAAUCCAC   119

1.5 Sequence 1219 from Patent EP2985353 NA coding protein psRNATarget
AY112141.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *=||||=||||||||||||||=||
targets:226   CUCAUCUAAUCUCACUCAAUCUAC   249

2.5 Zea mays CL24213_1 mRNA sequence NA coding protein psRNATarget
EU951448.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||*||||||||||||
targets:743   CCCAUCCAAUCCCACUCAAUCCAC   766

1.5 Zea mays clone 701961 mRNA sequence NA coding protein psRNATarget
XM_020552889.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||*||||||||||||
targets:872   CCCAUCCAAUCCCACUCAAUCCAC   895

1.5 PREDICTED: Zea mays pre-mRNA-splicing factor CWC21-like (LOC103654764), transcript variant X5, mRNA NA coding protein psRNATarget
BT085319.2
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||*||||||||||||
targets:174   CCCAUCCAAUCCCACUCAAUCCAC   197

1.5 Zea mays full-length cDNA clone ZM_BFb0375P22 mRNA, complete cds NA coding protein psRNATarget
BT087300.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||||||*||||||||
targets:1019   CCCAUCCAAUCUCACCCAAUCCAC   1042

1.5 Zea mays full-length cDNA clone ZM_BFb0032O11 mRNA, complete cds NA coding protein psRNATarget
XM_008647186.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||||||*||||||||
targets:1052   CCCAUCCAAUCUCACCCAAUCCAC   1075

1.5 PREDICTED: Zea mays B3 domain-containing protein (LOC100192994), transcript variant X1, mRNA NA coding protein psRNATarget
BT069115.2
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||*||||||||||||
targets:526   CCCAUCCAAUCCCACUCAAUCCAC   549

1.5 Zea mays full-length cDNA clone ZM_BFb0186N21 mRNA, complete cds NA coding protein psRNATarget
BT035134.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||||||*||||||||
targets:1214   CCCAUCCAAUCUCACCCAAUCCAC   1237

1.5 Zea mays full-length cDNA clone ZM_BFb0041I21 mRNA, complete cds NA coding protein psRNATarget
NM_001138165.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||||||*||||||||
targets:1214   CCCAUCCAAUCUCACCCAAUCCAC   1237

1.5 Zea mays B3 domain-containing protein (LOC100192994), mRNA NA coding protein psRNATarget
NM_001279968.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||*||||||||||||
targets:1528   CCCAUCCAAUCCCACUCAAUCCAC   1551

1.5 Zea mays putative methyltransferase PMT15 (LOC101027245), mRNA NA coding protein psRNATarget
BT088232.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||*||||||||||||
targets:1528   CCCAUCCAAUCCCACUCAAUCCAC   1551

1.5 Zea mays full-length cDNA clone ZM_BFc0086F14 mRNA, complete cds NA coding protein psRNATarget
EU955633.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||*||||||||||||
targets:1813   CCCAUCCAAUCCCACUCAAUCCAC   1836

1.5 Zea mays clone 1540038 transposon protein mRNA, complete cds NA coding protein psRNATarget
NM_001154031.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||*||||||||||||
targets:1813   CCCAUCCAAUCCCACUCAAUCCAC   1836

1.5 Zea mays uncharacterized LOC100281112 (LOC100281112), mRNA NA coding protein psRNATarget
XM_008679547.2
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||*||||||||||||
targets:2498   CCCAUCCAAUCCCACUCAAUCCAC   2521

1.5 PREDICTED: Zea mays putative methyltransferase PMT15 (LOC101027245), transcript variant X1, mRNA NA coding protein psRNATarget
NM_001175969.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||*||||||||||||
targets:1956   CCCAUCCAAUCCCACUCAAUCCAC   1979

1.5 Zea mays uncharacterized LOC100383311 (LOC100383311), mRNA NA coding protein psRNATarget
BT066874.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||*||||||||||||
targets:1956   CCCAUCCAAUCCCACUCAAUCCAC   1979

1.5 Zea mays full-length cDNA clone ZM_BFb0081D21 mRNA, complete cds NA coding protein psRNATarget
XM_020549843.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||*||||||||||||
targets:1079   CCCAUCCAAUCCCACUCAAUCCAC   1102

1.5 PREDICTED: Zea mays uncharacterized LOC100381972 (LOC100381972), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020549841.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||*||||||||||||
targets:1197   CCCAUCCAAUCCCACUCAAUCCAC   1220

1.5 PREDICTED: Zea mays uncharacterized LOC100381972 (LOC100381972), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020549842.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||*||||||||||||
targets:1197   CCCAUCCAAUCCCACUCAAUCCAC   1220

1.5 PREDICTED: Zea mays uncharacterized LOC100381972 (LOC100381972), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008658241.2
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||*||||||||||||
targets:1227   CCCAUCCAAUCCCACUCAAUCCAC   1250

1.5 PREDICTED: Zea mays probable peptidyl-tRNA hydrolase 2 (LOC103635865), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020545430.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||*||||||||||||
targets:5802   CCCAUCCAAUCCCACUCAAUCCAC   5825

1.5 PREDICTED: Zea mays uncharacterized LOC109942872 (LOC109942872), mRNA NA coding protein psRNATarget
LQ238032.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *=|||||||||*||||||||||||
targets:78   CUCAUCCAAUCCCACUCAAUCCAC   101

1.5 Sequence 4027 from Patent EP2985353 NA coding protein psRNATarget
HI405902.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *=|||||||||*||||||||||||
targets:78   CUCAUCCAAUCCCACUCAAUCCAC   101

1.5 Sequence 4027 from Patent EP2074227 NA coding protein psRNATarget
JB166363.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *=|||||||||*||||||||||||
targets:78   CUCAUCCAAUCCCACUCAAUCCAC   101

1.5 Sequence 4027 from Patent EP2559767 NA coding protein psRNATarget
LQ235135.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||*|||||||||||=
targets:96   CCCAUCCAAUCCCACUCAAUCCAU   119

2.5 Sequence 1130 from Patent EP2985353 NA coding protein psRNATarget
HI403005.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||*|||||||||||=
targets:96   CCCAUCCAAUCCCACUCAAUCCAU   119

2.5 Sequence 1130 from Patent EP2074227 NA coding protein psRNATarget
JB163466.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||*|||||||||||=
targets:96   CCCAUCCAAUCCCACUCAAUCCAU   119

2.5 Sequence 1130 from Patent EP2559767 NA coding protein psRNATarget
EZ064016.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *=|||||||||*||||||||||||
targets:118   CUCAUCCAAUCCCACUCAAUCCAC   141

1.5 TSA: Zea mays contig65139, mRNA sequence NA coding protein psRNATarget
BT043378.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||*|||||||||||=
targets:1464   CCCAUCCAAUCCCACUCAAUCCAU   1487

2.5 Zea mays full-length cDNA clone ZM_BFc0174B12 mRNA, complete cds NA coding protein psRNATarget
NM_001148918.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *||||||||||*|||||||||||=
targets:1464   CCCAUCCAAUCCCACUCAAUCCAU   1487

2.5 Zea mays nodulation homolog 1 (znod1), mRNA NA coding protein psRNATarget
XM_008661718.2
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *=|||||||||*||||||||||||
targets:2209   CUCAUCCAAUCCCACUCAAUCCAC   2232

1.5 PREDICTED: Zea mays serine/arginine repetitive matrix protein 1 (LOC103638926), mRNA NA coding protein psRNATarget
LQ238979.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *|=|||*|||||||||||||=|||
targets:77   CCUAUCAAAUCUCACUCAAUUCAC   100

2.5 Sequence 4974 from Patent EP2985353 NA coding protein psRNATarget
HI406849.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *|=|||*|||||||||||||=|||
targets:77   CCUAUCAAAUCUCACUCAAUUCAC   100

2.5 Sequence 4974 from Patent EP2074227 NA coding protein psRNATarget
JB167310.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *|=|||*|||||||||||||=|||
targets:77   CCUAUCAAAUCUCACUCAAUUCAC   100

2.5 Sequence 4974 from Patent EP2559767 NA coding protein psRNATarget
JB163481.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *=|||=|||||*||||||||||||
targets:96   CUCAUUCAAUCCCACUCAAUCCAC   119

2.5 Sequence 1145 from Patent EP2559767 NA coding protein psRNATarget
HI403020.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *=|||=|||||*||||||||||||
targets:96   CUCAUUCAAUCCCACUCAAUCCAC   119

2.5 Sequence 1145 from Patent EP2074227 NA coding protein psRNATarget
LQ235150.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *=|||=|||||*||||||||||||
targets:96   CUCAUUCAAUCCCACUCAAUCCAC   119

2.5 Sequence 1145 from Patent EP2985353 NA coding protein psRNATarget
EU942673.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *=|||=|||||*||||||||||||
targets:89   CUCAUUCAAUCCCACUCAAUCCAC   112

2.5 Zea mays clone 1529344 mRNA sequence NA coding protein psRNATarget
NM_001147844.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *=|||=|||||*||||||||||||
targets:1122   CUCAUUCAAUCCCACUCAAUCCAC   1145

2.5 Zea mays Phytanoyl-CoA dioxygenase (LOC100273407), mRNA NA coding protein psRNATarget
BT041052.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *=|||=|||||*||||||||||||
targets:1122   CUCAUUCAAUCCCACUCAAUCCAC   1145

2.5 Zea mays full-length cDNA clone ZM_BFc0169K03 mRNA, complete cds NA coding protein psRNATarget
NM_001174368.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *=||*=||||||||||||||||||
targets:1441   CUCACUCAAUCUCACUCAAUCCAC   1464

1.0 Zea mays hypothetical protein (LOC100381539), mRNA NA coding protein psRNATarget
BT061560.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *=||*=||||||||||||||||||
targets:1441   CUCACUCAAUCUCACUCAAUCCAC   1464

1.0 Zea mays full-length cDNA clone ZM_BFb0158C09 mRNA, complete cds NA coding protein psRNATarget
BT066987.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *=|||=|||||*||||||||||||
targets:1413   CUCAUUCAAUCCCACUCAAUCCAC   1436

2.5 Zea mays full-length cDNA clone ZM_BFb0138F03 mRNA, complete cds NA coding protein psRNATarget
HI403090.1
ncRNA:24   AGGU-AGGUUAGAGUGAGUUAGGUG   1
  *|||-|||||||*||||||||||||
targets:95   ACCAAUCCAAUCCCACUCAAUCCAC   119

1.5 Sequence 1215 from Patent EP2074227 NA coding protein psRNATarget
JB163551.1
ncRNA:24   AGGU-AGGUUAGAGUGAGUUAGGUG   1
  *|||-|||||||*||||||||||||
targets:95   ACCAAUCCAAUCCCACUCAAUCCAC   119

1.5 Sequence 1215 from Patent EP2559767 NA coding protein psRNATarget
LQ235220.1
ncRNA:24   AGGU-AGGUUAGAGUGAGUUAGGUG   1
  *|||-|||||||*||||||||||||
targets:95   ACCAAUCCAAUCCCACUCAAUCCAC   119

1.5 Sequence 1215 from Patent EP2985353 NA coding protein psRNATarget
XM_008676887.2
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  |==*||||||||||=||||||||=
targets:2639   UUUUUCCAAUCUCAUUCAAUCCAU   2662

2.5 PREDICTED: Zea mays lectin-like receptor kinase 7 (LOC100281599), transcript variant X1, mRNA NA coding protein psRNATarget
EZ064093.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *|||*||||||*|||||||||||=
targets:186   CCCACCCAAUCCCACUCAAUCCAU   209

2.5 TSA: Zea mays contig65216, mRNA sequence NA coding protein psRNATarget
EU957033.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *|=|*||||||||||*||||||||
targets:1396   CCUACCCAAUCUCACCCAAUCCAC   1419

1.5 Zea mays clone 1581039 mRNA sequence NA coding protein psRNATarget
EU957741.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *|=|*||||||||||*||||||||
targets:1397   CCUACCCAAUCUCACCCAAUCCAC   1420

1.5 Zea mays clone 1613489 mRNA sequence NA coding protein psRNATarget
JB169468.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *=||*||||||*|||||||||||=
targets:71   CUCACCCAAUCCCACUCAAUCCAU   94

2.5 Sequence 7132 from Patent EP2559767 NA coding protein psRNATarget
HI409007.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *=||*||||||*|||||||||||=
targets:71   CUCACCCAAUCCCACUCAAUCCAU   94

2.5 Sequence 7132 from Patent EP2074227 NA coding protein psRNATarget
LQ241137.1
ncRNA:24   AGGUAGGUUAGAGUGAGUUAGGUG   1
  *=||*||||||*|||||||||||=
targets:71   CUCACCCAAUCCCACUCAAUCCAU   94

2.5 Sequence 7132 from Patent EP2985353 NA coding protein psRNATarget
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