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BaseInfo

ncRNA ID novel_zma_miR3037
Species Zea mays
Class miRNA
Genome position Chr7:4520105-4520308 [-]
Reference genome RefGen_v4
Source SRR2089714;SRR2089699;SRR2089700
Length 24
Mature sequence(if miRNA) 181 - AGGCAGCAGCGGCAAUGUAGGCUC - 204
Stem-loop(if miRNA) --                                                              A                      GGACGUUCA     U
  AGGCAGCAGCGGCAAUGUAGGCUCCGAUACCAAUUGUAACGCACCCACUGGGCCAGUCCGCC AAAGCCCACCAUCGCCAGCGUC         UGCGC C
  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||         |||||
  UCCGUCGUCGCCGUUACAUCCGAGGCUAUGGUUAACAUUGCGUGGGUGACCCGGUCAGGCGG UUUCGGGUGGUAGCGGUCGCAG         ACGCG G
GG                                                              A                      AUUUAUCCG     U
Stem-loop sequence AGGCAGCAGCGGCAAUGUAGGCUCCGAUACCAAUUGUAACGCACCCACUGGGCCAGUCCGCCAAAAGCCCACCAUCGCCAGCGUCGGACGUUCAUGCGCUCGUGCGCAGCCUAUUUAGACGCUGGCGAUGGUGGGCUUUAGGCGGACUGGCCCAGUGGGUGCGUUACAAUUGGUAUCGGAGCCUACAUUGCCGCUGCUGCCUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020550504.1
ncRNA:24   CUCGGAUGUAACGGCGACGACGGA   1
  *=|==|=||||||||=||||||||
targets:2604   CGGUUUGCAUUGCCGUUGCUGCCU   2627

2.5 PREDICTED: Zea mays mitogen-activated protein kinase kinase kinase 2-like (LOC103652526), mRNA NA coding protein psRNATarget
EZ090393.1
ncRNA:24   CUCGGAUGUAACGGCGACGACGGA   1
  *|*=|*|||||||||||||||*||
targets:83   UAUUCAACAUUGCCGCUGCUGGCU   106

2.5 TSA: Zea mays contig26040, mRNA sequence NA coding protein psRNATarget