ncRNA ID | novel_zma_miR3037 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr7:4520105-4520308 [-] |
Reference genome | RefGen_v4 |
Source | SRR2089714;SRR2089699;SRR2089700 |
Length | 24 |
Mature sequence(if miRNA) | 181 - AGGCAGCAGCGGCAAUGUAGGCUC - 204 |
Stem-loop(if miRNA) |
--                                                              A                      GGACGUUCA     U   AGGCAGCAGCGGCAAUGUAGGCUCCGAUACCAAUUGUAACGCACCCACUGGGCCAGUCCGCC AAAGCCCACCAUCGCCAGCGUC         UGCGC C   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||         |||||   UCCGUCGUCGCCGUUACAUCCGAGGCUAUGGUUAACAUUGCGUGGGUGACCCGGUCAGGCGG UUUCGGGUGGUAGCGGUCGCAG         ACGCG G GG                                                              A                      AUUUAUCCG     U |
Stem-loop sequence | AGGCAGCAGCGGCAAUGUAGGCUCCGAUACCAAUUGUAACGCACCCACUGGGCCAGUCCGCCAAAAGCCCACCAUCGCCAGCGUCGGACGUUCAUGCGCUCGUGCGCAGCCUAUUUAGACGCUGGCGAUGGUGGGCUUUAGGCGGACUGGCCCAGUGGGUGCGUUACAAUUGGUAUCGGAGCCUACAUUGCCGCUGCUGCCUGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_020550504.1 |
|
2.5 | PREDICTED: Zea mays mitogen-activated protein kinase kinase kinase 2-like (LOC103652526), mRNA | NA | coding protein | psRNATarget | |||||||||
EZ090393.1 |
|
2.5 | TSA: Zea mays contig26040, mRNA sequence | NA | coding protein | psRNATarget |