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BaseInfo

ncRNA ID novel_zma_miR3036
Species Zea mays
Class miRNA
Genome position Chr7:18566514-18566618 [-]
Reference genome RefGen_v4
Source SRR2089714;SRR2089701;SRR2089705
Length 24
Mature sequence(if miRNA) 82 - AAGUUGUGACGUAGUAUGUGUAGA - 105
Stem-loop(if miRNA) --         C   G                A C  U     CA      CG
  AAGUUGUGA GUA UAUGUGUAGAAACCUA G GA CUACA  UGAAAU  U
  ||||||||| ||| |||||||||||||||| | || |||||  ||||||
  UUCAACACU CGU AUACACAUCUUUGGAU C CU GAUGU  ACUUUG  A
AU         C   G                A U  U     -A      UG
Stem-loop sequence AAGUUGUGACGUAGUAUGUGUAGAAACCUAAGCGAUCUACACAUGAAAUCGUAGUGUUUCAAUGUAGUUCUCAUAGGUUUCUACACAUAGUGCCUCACAACUUUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ235339.1
ncRNA:24   AGAUGUGUAUGAUGCAGUGUUGAA   1
  ||||||||||*||=||||||||||
targets:155   UCUACACAUAGUAUGUCACAACUU   178

2.5 Sequence 1334 from Patent EP2985353 NA coding protein psRNATarget
HI403209.1
ncRNA:24   AGAUGUGUAUGAUGCAGUGUUGAA   1
  ||||||||||*||=||||||||||
targets:155   UCUACACAUAGUAUGUCACAACUU   178

2.5 Sequence 1334 from Patent EP2074227 NA coding protein psRNATarget
JB163670.1
ncRNA:24   AGAUGUGUAUGAUGCAGUGUUGAA   1
  ||||||||||*||=||||||||||
targets:155   UCUACACAUAGUAUGUCACAACUU   178

2.5 Sequence 1334 from Patent EP2559767 NA coding protein psRNATarget