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BaseInfo

ncRNA ID novel_zma_miR3035
Species Zea mays
Class miRNA
Genome position Chr7:46624490-46624570 [-]
Reference genome RefGen_v4
Source SRR2089714;SRR2089715
Length 24
Mature sequence(if miRNA) 58 - GCUGGAAACGAGUCGAGCCGAGCU - 81
Stem-loop(if miRNA) --  U  AAA                C  C     U  G  C
  GC GG   CGAGUCGAGCCGAGCU GG UCGGC CG UG A
  || ||   |||||||||||||||| || ||||| || || G
  CG UC   GCUCGGCUCGGCUCGA CC AGUCG GU AC C
CC  C  --G                A  -     -  G  U
Stem-loop sequence GCUGGAAACGAGUCGAGCCGAGCUCGGCUCGGCUCGGUGCAGCUCAGUGGCUGACCAAGCUCGGCUCGGCUCGGCUCGCCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020545682.1
ncRNA:24   UCGAGCCGAGCUGAGCAAAGGUCG   1
  =||||||||||=||||||||||||
targets:3720   GGCUCGGCUCGGCUCGUUUCCAGC   3743

1.5 PREDICTED: Zea mays zinc finger BED domain-containing protein RICESLEEPER 2-like (LOC109943000), transcript variant X2, mRNA NA coding protein psRNATarget