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BaseInfo

ncRNA ID	novel_zma_miR3022
Species	Zea mays
Class	miRNA
Genome position	Chr7:130843411-130843462 [+]
Reference genome	RefGen_v4
Source	SRR2089714
Length	24
Mature sequence(if miRNA)	29 - CCCAUCGGGUUACGGGUUUCGGGU - 52
Stem-loop(if miRNA)	--  -         -   UAAU     A   CC AAACCCGUA CCC    UGGGU A   || ||||||||| |||    |||||   GG UUUGGGCAU GGG    ACCCA A UG  C         U   --CU     A
Stem-loop sequence	CCAAACCCGUACCCUAAUUGGGUAAAAACCCAUCGGGUUACGGGUUUCGGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
HI405819.1	ncRNA:24   UGGGCUUUGGGCAUUGGGCUACCC   1   ||||||||||||*||||||||||| targets:10   ACCCGAAACCCGAAACCCGAUGGG   33 Target Full Sequence	1.5	Sequence 3944 from Patent EP2074227	NA	coding protein	psRNATarget
LQ237949.1	ncRNA:24   UGGGCUUUGGGCAUUGGGCUACCC   1   ||||||||||||*||||||||||| targets:10   ACCCGAAACCCGAAACCCGAUGGG   33 Target Full Sequence	1.5	Sequence 3944 from Patent EP2985353	NA	coding protein	psRNATarget
JB166280.1	ncRNA:24   UGGGCUUUGGGCAUUGGGCUACCC   1   ||||||||||||*||||||||||| targets:10   ACCCGAAACCCGAAACCCGAUGGG   33 Target Full Sequence	1.5	Sequence 3944 from Patent EP2559767	NA	coding protein	psRNATarget
BT084992.1	ncRNA:24   UGGGCUUUGGGCAUUGGGCUACCC   1   ||||||||||||*||||||||||| targets:878   ACCCGAAACCCGAAACCCGAUGGG   901 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0222N10 mRNA, complete cds	NA	coding protein	psRNATarget
EU945315.1	ncRNA:24   UGGGCUUUGGGCAUUGGGCUACCC   1   ||||||||||||*||||||||||| targets:790   ACCCGAAACCCGAAACCCGAUGGG   813 Target Full Sequence	1.5	Zea mays clone 257965 mRNA sequence	NA	coding protein	psRNATarget
NM_001112293.3	ncRNA:24   UGGGCUUUGGGCAUUGGGCUACCC   1   ||||||||||||*||||||||||| targets:2226   ACCCGAAACCCGAAACCCGAUGGG   2249 Target Full Sequence	1.5	Zea mays protein disulfide isomerase 5 (pdi5), mRNA	NA	coding protein	psRNATarget