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BaseInfo

ncRNA ID novel_zma_miR3015
Species Zea mays
Class miRNA
Genome position Chr6:7406344-7406413 [+]
Reference genome RefGen_v4
Source SRR2089714;SRR2287031;SRR2287159
Length 24
Mature sequence(if miRNA) 47 - AGCGACAAGUAAAACGAAACGGAG - 70
Stem-loop(if miRNA) --CA     U     G         A   UUU  A
    GUUUC UUUUA UUGUCGCUG AUA   CA U
    ||||| ||||| ||||||||| |||   ||
    CAAAG AAAAU AACAGCGAC UAU   GU U
GAGG     C     G         C   CAC  U
Stem-loop sequence CAGUUUCUUUUUAGUUGUCGCUGAAUAUUUCAAUUUUGCACUAUCCAGCGACAAGUAAAACGAAACGGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB169695.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:9   CUCCGUUUCGUUUUAGUUGUCGCU   32

1.5 Sequence 7359 from Patent EP2559767 NA coding protein psRNATarget
HI409234.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:9   CUCCGUUUCGUUUUAGUUGUCGCU   32

1.5 Sequence 7359 from Patent EP2074227 NA coding protein psRNATarget
LQ241364.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:9   CUCCGUUUCGUUUUAGUUGUCGCU   32

1.5 Sequence 7359 from Patent EP2985353 NA coding protein psRNATarget
JB167730.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:12   CUCCGUUUCGUUUUAGUUGUCGCU   35

1.5 Sequence 5394 from Patent EP2559767 NA coding protein psRNATarget
HI407269.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:12   CUCCGUUUCGUUUUAGUUGUCGCU   35

1.5 Sequence 5394 from Patent EP2074227 NA coding protein psRNATarget
LQ239399.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:12   CUCCGUUUCGUUUUAGUUGUCGCU   35

1.5 Sequence 5394 from Patent EP2985353 NA coding protein psRNATarget
HI407324.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:12   CUCCGUUUCGUUUUAGUUGUCGCU   35

1.5 Sequence 5449 from Patent EP2074227 NA coding protein psRNATarget
LQ239454.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:12   CUCCGUUUCGUUUUAGUUGUCGCU   35

1.5 Sequence 5449 from Patent EP2985353 NA coding protein psRNATarget
JB167672.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:12   CUCCGUUUCGUUUUAGUUGUCGCU   35

1.5 Sequence 5336 from Patent EP2559767 NA coding protein psRNATarget
JB167785.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:12   CUCCGUUUCGUUUUAGUUGUCGCU   35

1.5 Sequence 5449 from Patent EP2559767 NA coding protein psRNATarget
LQ239341.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:12   CUCCGUUUCGUUUUAGUUGUCGCU   35

1.5 Sequence 5336 from Patent EP2985353 NA coding protein psRNATarget
HI407211.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:12   CUCCGUUUCGUUUUAGUUGUCGCU   35

1.5 Sequence 5336 from Patent EP2074227 NA coding protein psRNATarget
JB167766.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:12   CUCCGUUUCGUUUUAGUUGUCGCU   35

1.5 Sequence 5430 from Patent EP2559767 NA coding protein psRNATarget
HI407230.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:12   CUCCGUUUCGUUUUAGUUGUCGCU   35

1.5 Sequence 5355 from Patent EP2074227 NA coding protein psRNATarget
JB167691.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:12   CUCCGUUUCGUUUUAGUUGUCGCU   35

1.5 Sequence 5355 from Patent EP2559767 NA coding protein psRNATarget
LQ239435.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:12   CUCCGUUUCGUUUUAGUUGUCGCU   35

1.5 Sequence 5430 from Patent EP2985353 NA coding protein psRNATarget
LQ239360.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:12   CUCCGUUUCGUUUUAGUUGUCGCU   35

1.5 Sequence 5355 from Patent EP2985353 NA coding protein psRNATarget
HI407305.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:12   CUCCGUUUCGUUUUAGUUGUCGCU   35

1.5 Sequence 5430 from Patent EP2074227 NA coding protein psRNATarget
BT062468.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:577   CUCCGUUUCGUUUUAGUUGUCGCU   600

1.5 Zea mays full-length cDNA clone ZM_BFb0302A02 mRNA, complete cds NA coding protein psRNATarget
NM_001153043.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:841   CUCCGUUUCGUUUUAGUUGUCGCU   864

1.5 Zea mays uncharacterized LOC100280105 (LOC100280105), mRNA NA coding protein psRNATarget
BT055583.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:841   CUCCGUUUCGUUUUAGUUGUCGCU   864

1.5 Zea mays full-length cDNA clone ZM_BFc0049P16 mRNA, complete cds NA coding protein psRNATarget
EU968044.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:1030   CUCCGUUUCGUUUUAGUUGUCGCU   1053

1.5 Zea mays clone 313382 adenylyl-sulfate kinase 1 mRNA, complete cds NA coding protein psRNATarget
BT035546.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:918   CUCCGUUUCGUUUUAGUUGUCGCU   941

1.5 Zea mays full-length cDNA clone ZM_BFb0068P01 mRNA, complete cds NA coding protein psRNATarget
EU945792.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:1184   CUCCGUUUCGUUUUAGUUGUCGCU   1207

1.5 Zea mays clone 285684 mRNA sequence NA coding protein psRNATarget
EU971616.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:1168   CUCCGUUUCGUUUUAGUUGUCGCU   1191

1.5 Zea mays clone 368130 rieske domain containing protein mRNA, complete cds NA coding protein psRNATarget
EU964554.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:1333   CUCCGUUUCGUUUUAGUUGUCGCU   1356

1.5 Zea mays clone 279840 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
XM_020549872.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:1271   CUCCGUUUCGUUUUAGUUGUCGCU   1294

1.5 PREDICTED: Zea mays uncharacterized LOC100382893 (LOC100382893), transcript variant X1, mRNA NA coding protein psRNATarget
NM_001175582.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:1438   CUCCGUUUCGUUUUAGUUGUCGCU   1461

1.5 Zea mays uncharacterized LOC100382893 (LOC100382893), mRNA NA coding protein psRNATarget
BT065656.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:1438   CUCCGUUUCGUUUUAGUUGUCGCU   1461

1.5 Zea mays full-length cDNA clone ZM_BFc0005B18 mRNA, complete cds NA coding protein psRNATarget
NM_001156357.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:1521   CUCCGUUUCGUUUUAGUUGUCGCU   1544

1.5 Zea mays Acetylornithine deacetylase (pco121857a), mRNA NA coding protein psRNATarget
EU964807.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:1521   CUCCGUUUCGUUUUAGUUGUCGCU   1544

1.5 Zea mays clone 281665 acetylornithine deacetylase mRNA, complete cds NA coding protein psRNATarget
EU971439.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:2119   CUCCGUUUCGUUUUAGUUGUCGCU   2142

1.5 Zea mays clone 364738 cyclin-like F-box mRNA, complete cds NA coding protein psRNATarget
NM_001158152.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||||||||*||||||||
targets:2119   CUCCGUUUCGUUUUAGUUGUCGCU   2142

1.5 Zea mays cyclin-like F-box (LOC100285258), mRNA NA coding protein psRNATarget
HI409683.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  ||||||||=||||||*||||||||
targets:2   CUCCGUUUUGUUUUAGUUGUCGCU   25

2.5 Sequence 7808 from Patent EP2074227 NA coding protein psRNATarget
JB170144.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  ||||||||=||||||*||||||||
targets:2   CUCCGUUUUGUUUUAGUUGUCGCU   25

2.5 Sequence 7808 from Patent EP2559767 NA coding protein psRNATarget
LQ241813.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  ||||||||=||||||*||||||||
targets:2   CUCCGUUUUGUUUUAGUUGUCGCU   25

2.5 Sequence 7808 from Patent EP2985353 NA coding protein psRNATarget
LQ242181.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  ||=||||||||||||*||||||||
targets:7   CUUCGUUUCGUUUUAGUUGUCGCU   30

1.5 Sequence 8176 from Patent EP2985353 NA coding protein psRNATarget
HI410051.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  ||=||||||||||||*||||||||
targets:7   CUUCGUUUCGUUUUAGUUGUCGCU   30

1.5 Sequence 8176 from Patent EP2074227 NA coding protein psRNATarget
JB170512.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  ||=||||||||||||*||||||||
targets:7   CUUCGUUUCGUUUUAGUUGUCGCU   30

1.5 Sequence 8176 from Patent EP2559767 NA coding protein psRNATarget
HI408854.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:7   CUCCGUUUCUUUUUAUUUGUCGCU   30

2.5 Sequence 6979 from Patent EP2074227 NA coding protein psRNATarget
LQ240984.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:7   CUCCGUUUCUUUUUAUUUGUCGCU   30

2.5 Sequence 6979 from Patent EP2985353 NA coding protein psRNATarget
JB169315.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:7   CUCCGUUUCUUUUUAUUUGUCGCU   30

2.5 Sequence 6979 from Patent EP2559767 NA coding protein psRNATarget
JB170076.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 7740 from Patent EP2559767 NA coding protein psRNATarget
LQ241745.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 7740 from Patent EP2985353 NA coding protein psRNATarget
HI409615.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 7740 from Patent EP2074227 NA coding protein psRNATarget
HI408570.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 6695 from Patent EP2074227 NA coding protein psRNATarget
LQ240748.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 6743 from Patent EP2985353 NA coding protein psRNATarget
LQ240700.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 6695 from Patent EP2985353 NA coding protein psRNATarget
JB170160.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 7824 from Patent EP2559767 NA coding protein psRNATarget
HI408710.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 6835 from Patent EP2074227 NA coding protein psRNATarget
LQ242326.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 8321 from Patent EP2985353 NA coding protein psRNATarget
JB169031.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 6695 from Patent EP2559767 NA coding protein psRNATarget
LQ240840.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 6835 from Patent EP2985353 NA coding protein psRNATarget
HI408945.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 7070 from Patent EP2074227 NA coding protein psRNATarget
LQ241829.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 7824 from Patent EP2985353 NA coding protein psRNATarget
JB169171.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 6835 from Patent EP2559767 NA coding protein psRNATarget
JB169406.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 7070 from Patent EP2559767 NA coding protein psRNATarget
HI410196.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 8321 from Patent EP2074227 NA coding protein psRNATarget
JB170077.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 7741 from Patent EP2559767 NA coding protein psRNATarget
JB170422.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 8086 from Patent EP2559767 NA coding protein psRNATarget
HI408618.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 6743 from Patent EP2074227 NA coding protein psRNATarget
LQ241458.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 7453 from Patent EP2985353 NA coding protein psRNATarget
HI409328.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 7453 from Patent EP2074227 NA coding protein psRNATarget
HI409699.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 7824 from Patent EP2074227 NA coding protein psRNATarget
LQ241746.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 7741 from Patent EP2985353 NA coding protein psRNATarget
LQ242091.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 8086 from Patent EP2985353 NA coding protein psRNATarget
HI409616.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 7741 from Patent EP2074227 NA coding protein psRNATarget
JB169789.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 7453 from Patent EP2559767 NA coding protein psRNATarget
JB169079.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 6743 from Patent EP2559767 NA coding protein psRNATarget
JB170657.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 8321 from Patent EP2559767 NA coding protein psRNATarget
LQ241075.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 7070 from Patent EP2985353 NA coding protein psRNATarget
HI409961.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 8086 from Patent EP2074227 NA coding protein psRNATarget
JB170060.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 7724 from Patent EP2559767 NA coding protein psRNATarget
HI409599.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 7724 from Patent EP2074227 NA coding protein psRNATarget
LQ241729.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:10   CUCCGUUUCUUUUUAUUUGUCGCU   33

2.5 Sequence 7724 from Patent EP2985353 NA coding protein psRNATarget
HI403294.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:17   CUCCGUUUCUUUUUAUUUGUCGCU   40

2.5 Sequence 1419 from Patent EP2074227 NA coding protein psRNATarget
JB163755.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:17   CUCCGUUUCUUUUUAUUUGUCGCU   40

2.5 Sequence 1419 from Patent EP2559767 NA coding protein psRNATarget
LQ235424.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:17   CUCCGUUUCUUUUUAUUUGUCGCU   40

2.5 Sequence 1419 from Patent EP2985353 NA coding protein psRNATarget
JB163830.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:17   CUCCGUUUCUUUUUAUUUGUCGCU   40

2.5 Sequence 1494 from Patent EP2559767 NA coding protein psRNATarget
LQ235499.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:17   CUCCGUUUCUUUUUAUUUGUCGCU   40

2.5 Sequence 1494 from Patent EP2985353 NA coding protein psRNATarget
HI403369.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:17   CUCCGUUUCUUUUUAUUUGUCGCU   40

2.5 Sequence 1494 from Patent EP2074227 NA coding protein psRNATarget
EZ065373.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  =||||||||||||||*||||||||
targets:284   UUCCGUUUCGUUUUAGUUGUCGCU   307

1.5 TSA: Zea mays contig01006, mRNA sequence NA coding protein psRNATarget
EU964901.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:503   CUCCGUUUCUUUUUAUUUGUCGCU   526

2.5 Zea mays clone 282450 mRNA sequence NA coding protein psRNATarget
EU974849.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:575   CUCCGUUUCUUUUUAUUUGUCGCU   598

2.5 Zea mays clone 459794 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
NM_001151882.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:575   CUCCGUUUCUUUUUAUUUGUCGCU   598

2.5 Zea mays uncharacterized LOC100278686 (LOC100278686), mRNA NA coding protein psRNATarget
BT060817.2
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:236   CUCCGUUUCUUUUUAUUUGUCGCU   259

2.5 Zea mays full-length cDNA clone ZM_BFb0054B23 mRNA, complete cds NA coding protein psRNATarget
XM_008671993.2
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:1172   CUCCGUUUCUUUUUAUUUGUCGCU   1195

2.5 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X2, mRNA NA coding protein psRNATarget
NM_001156655.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:1294   CUCCGUUUCUUUUUAUUUGUCGCU   1317

2.5 Zea mays wax synthase (LOC100283756), mRNA NA coding protein psRNATarget
EU965844.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:1294   CUCCGUUUCUUUUUAUUUGUCGCU   1317

2.5 Zea mays clone 289333 wax synthase isoform 3 mRNA, complete cds NA coding protein psRNATarget
XM_008647346.2
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:147   CUCCGUUUCUUUUUAUUUGUCGCU   170

2.5 PREDICTED: Zea mays E3 ubiquitin-protein ligase Os03g0188200 (LOC103626988), mRNA NA coding protein psRNATarget
XM_008651544.2
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:1361   CUCCGUUUCUUUUUAUUUGUCGCU   1384

2.5 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008671992.2
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:1278   CUCCGUUUCUUUUUAUUUGUCGCU   1301

2.5 PREDICTED: Zea mays uncharacterized LOC103647454 (LOC103647454), transcript variant X1, mRNA NA coding protein psRNATarget
XM_008677073.2
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:1533   CUCCGUUUCUUUUUAUUUGUCGCU   1556

2.5 PREDICTED: Zea mays probable glycosyltransferase At5g03795 (LOC103651446), mRNA NA coding protein psRNATarget
NM_001148943.2
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:1549   CUCCGUUUCUUUUUAUUUGUCGCU   1572

2.5 Zea mays uncharacterized LOC100274590 (LOC100274590), mRNA NA coding protein psRNATarget
BT088136.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:778   CUCCGUUUCUUUUUAUUUGUCGCU   801

2.5 Zea mays full-length cDNA clone ZM_BFc0030P23 mRNA, complete cds NA coding protein psRNATarget
NM_001196908.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:778   CUCCGUUUCUUUUUAUUUGUCGCU   801

2.5 Zea mays uncharacterized LOC100502430 (LOC100502430), mRNA NA coding protein psRNATarget
XM_008651543.2
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:2502   CUCCGUUUCUUUUUAUUUGUCGCU   2525

2.5 PREDICTED: Zea mays uncharacterized LOC103630492 (LOC103630492), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020551485.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||=|||||||||||*||||||||
targets:2534   CUCUGUUUCGUUUUAGUUGUCGCU   2557

1.5 PREDICTED: Zea mays putative cytochrome P450 superfamily protein (LOC100279319), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020544250.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:2441   CUCCGUUUCUUUUUAUUUGUCGCU   2464

2.5 PREDICTED: Zea mays G-type lectin S-receptor-like serine/threonine-protein kinase B120 (LOC103638818), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020546173.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:1469   CUCCGUUUCUUUUUAUUUGUCGCU   1492

2.5 PREDICTED: Zea mays myb-related protein P-like (LOC109943268), mRNA NA coding protein psRNATarget
XM_020546615.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:2802   CUCCGUUUCUUUUUAUUUGUCGCU   2825

2.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020546614.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:2819   CUCCGUUUCUUUUUAUUUGUCGCU   2842

2.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X3, mRNA NA coding protein psRNATarget
XM_020546612.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:2925   CUCCGUUUCUUUUUAUUUGUCGCU   2948

2.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020546613.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||=||||||||
targets:3704   CUCCGUUUCUUUUUAUUUGUCGCU   3727

2.5 PREDICTED: Zea mays uncharacterized LOC103642456 (LOC103642456), transcript variant X2, mRNA NA coding protein psRNATarget
XM_008667486.2
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  =||||||||||||||*||||||||
targets:1339   UUCCGUUUCGUUUUAGUUGUCGCU   1362

1.5 PREDICTED: Zea mays mannan endo-1,4-beta-mannosidase 3 (LOC103644285), transcript variant X1, mRNA NA coding protein psRNATarget
JB169555.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||=|||||*|||||=||||||||
targets:7   CUCUGUUUCUUUUUAUUUGUCGCU   30

2.5 Sequence 7219 from Patent EP2559767 NA coding protein psRNATarget
HI409094.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||=|||||*|||||=||||||||
targets:7   CUCUGUUUCUUUUUAUUUGUCGCU   30

2.5 Sequence 7219 from Patent EP2074227 NA coding protein psRNATarget
LQ241224.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||=|||||*|||||=||||||||
targets:7   CUCUGUUUCUUUUUAUUUGUCGCU   30

2.5 Sequence 7219 from Patent EP2985353 NA coding protein psRNATarget
BT068381.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||=|||||*|||||=||||||||
targets:1115   CUCUGUUUCUUUUUAUUUGUCGCU   1138

2.5 Zea mays full-length cDNA clone ZM_BFb0135M15 mRNA, complete cds NA coding protein psRNATarget
EU956063.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||=|||||*|||||=||||||||
targets:1068   CUCUGUUUCUUUUUAUUUGUCGCU   1091

2.5 Zea mays clone 1556707 mRNA sequence NA coding protein psRNATarget
EU973028.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||=|||||*|||||=||||||||
targets:1174   CUCUGUUUCUUUUUAUUUGUCGCU   1197

2.5 Zea mays clone 391970 hypothetical protein mRNA, complete cds NA coding protein psRNATarget
BT088158.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||=|||||*|||||=||||||||
targets:1208   CUCUGUUUCUUUUUAUUUGUCGCU   1231

2.5 Zea mays full-length cDNA clone ZM_BFc0038O11 mRNA, complete cds NA coding protein psRNATarget
XM_008656167.2
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||=|||||*|||||=||||||||
targets:1227   CUCUGUUUCUUUUUAUUUGUCGCU   1250

2.5 PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X2, mRNA NA coding protein psRNATarget
NM_001138729.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||=|||||*|||||=||||||||
targets:1408   CUCUGUUUCUUUUUAUUUGUCGCU   1431

2.5 Zea mays uncharacterized LOC100193630 (LOC100193630), mRNA NA coding protein psRNATarget
BT035950.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||=|||||*|||||=||||||||
targets:1408   CUCUGUUUCUUUUUAUUUGUCGCU   1431

2.5 Zea mays full-length cDNA clone ZM_BFb0089G20 mRNA, complete cds NA coding protein psRNATarget
XM_008656166.2
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||=|||||*|||||=||||||||
targets:1272   CUCUGUUUCUUUUUAUUUGUCGCU   1295

2.5 PREDICTED: Zea mays uncharacterized LOC100193630 (LOC100193630), transcript variant X1, mRNA NA coding protein psRNATarget
EU957018.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||=|||||*|||||=||||||||
targets:2006   CUCUGUUUCUUUUUAUUUGUCGCU   2029

2.5 Zea mays clone 1580670 cytochrome P450 CYP84A33v2 mRNA, complete cds NA coding protein psRNATarget
EU957761.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  *|||||||=||||||*||||||||
targets:298   AUCCGUUUUGUUUUAGUUGUCGCU   321

2.5 Zea mays clone 1614826 mRNA sequence NA coding protein psRNATarget
LQ238250.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |*|||||||||||||*||||||||
targets:2   CCCCGUUUCGUUUUAGUUGUCGCU   25

1.5 Sequence 4245 from Patent EP2985353 NA coding protein psRNATarget
JB166581.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |*|||||||||||||*||||||||
targets:2   CCCCGUUUCGUUUUAGUUGUCGCU   25

1.5 Sequence 4245 from Patent EP2559767 NA coding protein psRNATarget
HI406120.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |*|||||||||||||*||||||||
targets:2   CCCCGUUUCGUUUUAGUUGUCGCU   25

1.5 Sequence 4245 from Patent EP2074227 NA coding protein psRNATarget
LQ235529.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||*||||||||
targets:17   CUCCGUUUCUUUUUAGUUGUCGCU   40

2.5 Sequence 1524 from Patent EP2985353 NA coding protein psRNATarget
HI403399.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||*||||||||
targets:17   CUCCGUUUCUUUUUAGUUGUCGCU   40

2.5 Sequence 1524 from Patent EP2074227 NA coding protein psRNATarget
JB163748.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||*||||||||
targets:17   CUCCGUUUCUUUUUAGUUGUCGCU   40

2.5 Sequence 1412 from Patent EP2559767 NA coding protein psRNATarget
LQ235417.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||*||||||||
targets:17   CUCCGUUUCUUUUUAGUUGUCGCU   40

2.5 Sequence 1412 from Patent EP2985353 NA coding protein psRNATarget
JB163860.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||*||||||||
targets:17   CUCCGUUUCUUUUUAGUUGUCGCU   40

2.5 Sequence 1524 from Patent EP2559767 NA coding protein psRNATarget
HI403287.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||*||||||||
targets:17   CUCCGUUUCUUUUUAGUUGUCGCU   40

2.5 Sequence 1412 from Patent EP2074227 NA coding protein psRNATarget
EZ112557.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||*||||||||
targets:54   CUCCGUUUCUUUUUAGUUGUCGCU   77

2.5 TSA: Zea mays contig48218, mRNA sequence NA coding protein psRNATarget
BT062074.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||*||||||||
targets:1143   CUCCGUUUCUUUUUAGUUGUCGCU   1166

2.5 Zea mays full-length cDNA clone ZM_BFb0212O02 mRNA, complete cds NA coding protein psRNATarget
EU953599.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||*||||||||
targets:1231   CUCCGUUUCUUUUUAGUUGUCGCU   1254

2.5 Zea mays clone 1437867 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008682276.2
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||*||||||||
targets:1226   CUCCGUUUCUUUUUAGUUGUCGCU   1249

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X2, mRNA NA coding protein psRNATarget
EU973774.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||*||||||||
targets:1241   CUCCGUUUCUUUUUAGUUGUCGCU   1264

2.5 Zea mays clone 410704 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008682289.2
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||*||||||||
targets:1255   CUCCGUUUCUUUUUAGUUGUCGCU   1278

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X6, mRNA NA coding protein psRNATarget
NM_001158647.2
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||*||||||||
targets:1307   CUCCGUUUCUUUUUAGUUGUCGCU   1330

2.5 Zea mays F-box domain containing protein (LOC100285757), mRNA NA coding protein psRNATarget
EU973763.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||*||||||||
targets:1309   CUCCGUUUCUUUUUAGUUGUCGCU   1332

2.5 Zea mays clone 409560 F-box domain containing protein mRNA, complete cds NA coding protein psRNATarget
XM_008682282.2
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||*||||||||
targets:1415   CUCCGUUUCUUUUUAGUUGUCGCU   1438

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008674191.2
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||*||||||||
targets:1157   CUCCGUUUCUUUUUAGUUGUCGCU   1180

2.5 PREDICTED: Zea mays putative protein S-acyltransferase 16 (LOC100273154), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020553332.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||*||||||||
targets:2004   CUCCGUUUCUUUUUAGUUGUCGCU   2027

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X4, mRNA NA coding protein psRNATarget
XM_020553342.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||*||||||||
targets:2035   CUCCGUUUCUUUUUAGUUGUCGCU   2058

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X7, mRNA NA coding protein psRNATarget
XM_008677351.2
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||*||||||||
targets:2063   CUCCGUUUCUUUUUAGUUGUCGCU   2086

2.5 PREDICTED: Zea mays hypothetical protein (LOC103651662), mRNA NA coding protein psRNATarget
XM_020553327.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||*||||||||
targets:2117   CUCCGUUUCUUUUUAGUUGUCGCU   2140

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X1, mRNA NA coding protein psRNATarget
XM_020553339.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||*||||||||
targets:2148   CUCCGUUUCUUUUUAGUUGUCGCU   2171

2.5 PREDICTED: Zea mays F-box domain containing protein (LOC100285757), transcript variant X5, mRNA NA coding protein psRNATarget
XM_008679695.2
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||*||||||||
targets:263   CUCCGUUUCUUUUUAAUUGUCGCU   286

2.5 PREDICTED: Zea mays kinesin-like protein KIN-14O (LOC103652735), transcript variant X7, mRNA NA coding protein psRNATarget
XM_020537567.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||*||||||||
targets:1458   CUCCGUUUCUUUUUAGUUGUCGCU   1481

2.5 PREDICTED: Zea mays MADS2 (zmm2), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020552423.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||||||||*|||||*||||||||
targets:262   CUCCGUUUCUUUUUAAUUGUCGCU   285

2.5 PREDICTED: Zea mays kinesin-like protein KIN-14O (LOC103652735), transcript variant X5, mRNA NA coding protein psRNATarget
LQ238487.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||=|||||*|||||*||||||||
targets:4   CUCUGUUUCUUUUUAGUUGUCGCU   27

2.5 Sequence 4482 from Patent EP2985353 NA coding protein psRNATarget
JB166818.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||=|||||*|||||*||||||||
targets:4   CUCUGUUUCUUUUUAGUUGUCGCU   27

2.5 Sequence 4482 from Patent EP2559767 NA coding protein psRNATarget
HI406357.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||=|||||*|||||*||||||||
targets:4   CUCUGUUUCUUUUUAGUUGUCGCU   27

2.5 Sequence 4482 from Patent EP2074227 NA coding protein psRNATarget
EZ061437.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  ||||*||||*|||||=||||||||
targets:174   CUCCAUUUCUUUUUAUUUGUCGCU   197

2.5 TSA: Zea mays contig62559, mRNA sequence NA coding protein psRNATarget
EU957363.1
ncRNA:24   GAGGCAAAGCAAAAUGAACAGCGA   1
  |||=|||||*|||||*||||||||
targets:473   CUCUGUUUCUUUUUAGUUGUCGCU   496

2.5 Zea mays clone 1589847 mRNA sequence NA coding protein psRNATarget
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